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Name : DIP0283 (DIP0283) Accession : NP_938671.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Unknown Product : transport system permease (iron) Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1178 EC number : - Position : 250325 - 251878 bp Length : 1554 bp Strand : - Note : Similar to Treponema hyodysenteriae permease ShiD TR:O54371 (EMBL:U75349) (277 aa) fasta scores: E(): 0.0013, 21.739% id in 184 aa, and to Escherichia coli O157:H7 EDL933 transport system permease YabK TR:AAG54371 (EMBL:AE005183) (536 aa) fasta scores: E( DNA sequence : ATGAGAACTGGGTTGTGGATTTTTTCGGTGGTGGCGATCGCCGCGGTGGCGGTGGGCATTCCTTATGCCATGTTGTTGAA AGCGGCAGGGACGGGCACTGCGGCGGTCGCACCGATCATCCTCAGCAGCACAATTGCATTGTGTGCAACTTTGTTGGCGG TGGGTATTGGCACGGTGGGTGCGTTGGCGGCAGCGCAGTTTTCTCGTACAGTAGTATTGCTTCTCGACGTCATCCTGCTG TTCCAGCTCACCATCCCGCATTTTGTTATCGGTGCTGGTTGGAAGACGATCATGGGACGCACGGGTATTCACCTGTGCTC GCAGTGTAATTTTTCGGGCCTTGGGCCGTTGTTGTTCACGTTCACGGTGGCGTTTACCCCGTTGGCATATTTTGTGCAGC GCACGGCGTTGCGCTCGGTGTCGTCGCGTGAGGTGGATGCGGCTCGGGTGGCGGGCCTTCATGGGTGGGCGTTGTTTCGC GCGGTGTATCAGCCGCGGTTGGTGTTGTTTGCCCCTGCGCTTGCAGTGTTTATTTTTAGTGCGGCGTTGTCGGATCCGGT AACGCCGAATGTGATGGCGCCGCGGGCGTCGTTAGCGGCAACACGGGTGTGGTTCCAAGGCGATCAGGCGGGGACTGCGC TGGCGCTTACGTTGCCGGTGGCTGGTGCGGTGGTCGTTGCGGGGCTGGTGTATGCACGGCTGTTGCGTAGTAATCCGGCG TTGGTGGAGTTGCTTCATTTTGCTGGCAATTCTTCCGGCCAGCCACATCGTGCGGTGGGTGCGCAAGTGCGTGCCCCGCA GGCGGTGTTGTGCTTCTTGGGTGCAGTTGCGGGATTATTTGTGCTGGTGGCGGCCTTTCGTGGTTTTGTGCATGGTTCTG AGACGCCGATGGGCAATGCGGTGGTCAATACGGTGGGGTTGGCGTTTTTGGTGTTGTTGTGTTCGTTGTTGTTGTCGGCG GTTGCGTTGGGGGCGCGGCGTTCGTGTGGCCTGCGGTGGGGTTGGTTGGGCCGGCGTGGTATTGATGCTGTGTTTGCGTT GTTGGCGTTGTCGCCGGGGGCTGCGATTGGTTGTGGTTTGCAGATTGCGTTGAATCATCCGGGAGTGTACGGGCCGTGGG CGTCGTTAAGTTTGGTGTTGTTGGCGTGTCTGCCGAGTTCGCTGGCTATGACGTATTTTTTGATGGTTTATATCGGTCCG TTGATGTCGCGTTCGGAGTATATGGTGTCGTTGTTGCAGGGTGTTGGCCCACTGCGGGCGGTGGCGTCGATTGTGTTGCC GCGTTCGACGAATGTGGTGATTTTGGGCTTTTTGATGGTGTTTTCTAATGCGTCGGTACTAGCGGTGCCGTTGTTGTGGG TGAGTTCGCCGGATACTCCCCTTTTGATGTTGCGGCTTTTCACGCTTCTCGACGCCGCCAATTACCCGGCGGCGCTGTAC ATCAGCATGACTGTGTCTCTTTTTATCGTGTCCCTTGCTGGGGCGATCGTTGTGAGTATTAATGGCGTGGGTTTGGCTGC CTTCGCTAGGAAACAGGTGGCATCATGGCGTTAA Protein sequence : MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILL FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDB402_0206 | YP_005126719.1 | ABC transporter permease protein | Not tested | Not named | Protein | 3e-164 | 98 |
| potC | YP_005682547.1 | Spermidine/putrescine transport system permease PotC | Not tested | PiCp 3 | Protein | 3e-135 | 89 |
| potC | YP_005684638.1 | Spermidine/putrescine transport system permease PotC | Not tested | PiCp 3 | Protein | 3e-135 | 89 |
| cpfrc_00180 | YP_003782580.1 | hypothetical protein | Not tested | PiCp 3 | Protein | 7e-149 | 88 |
| potC | YP_005680456.1 | Spermidine/putrescine transport system permease PotC | Not tested | PiCp 3 | Protein | 8e-149 | 88 |
