|
Name : ulaA (DIP2333) Accession : NP_940634.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Virulence Product : PTS system ascorbate-specific transporter subunit IIC Function : - COG functional category : S : Function unknown COG ID : COG3037 EC number : - Position : 2438839 - 2440401 bp Length : 1563 bp Strand : + Note : membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr DNA sequence : ATGAATGCACTCATTGCTATCCCAGAGTTTCTGGTTAATGAGATCTTGTCAGTGCCGGCGTTTTTGATCGGCATCATCAC CGCTGTAGGACTTGGCGCCATGGGCAAAAAGACCGGCCAGGTTCTGGGCGGTGCTATCAAAGCTACGTTGGGTTTCCTGC TCATCGGTGCGGGAGCGTCGCTAGTCGTAGCATCTTTGGAACCATTGGGCACAATGATTCAAGGTGCCACCGGCGCCCAC GGTGTGGTCCCCACGAACGAAGCAATTGTTGGTATTGCGCAAAATCAATTCGGTGGCCAAGTCGCATGGCTGATGATCCT CGGATTCGCCATCTCTTTGGTCCTAGCCCGCATCACCCCGATGAGCTACGTGTTTCTAACCGGACACCACGTACTATTCA TGGCCACCATGCTGACAATGGTGCTCGCCGCCGCCGGTTTTGGCCCTTGGGTTGTGGTCCCCGTCGGCGCACTACTGTTG GGCATCTTGATGGTGTCGCTACCCGCAATCGCCCACCCATGGACGCGCCGCGTAACCGGTGACGACTCCATCGCAATCGG CCACTTCGGTACGGCTGGATACGTGGCGGCTGGTGCCGTCGGCAAGCTCGTAGGCGGCAAAAAAGAATCAATGTCCGCCT CCACGGAAGAGCTCAAACTCCCCGAAGGCCTACGATTCCTTCGCGACTCCATGGTCGCCACCGCACTTTCCATGGCATTA ATGTACGTCGTACTCGCCATCCTATTCATACTGCGCGCCGGCCAAAACGAAGCCTTCACCGCATTCGCAAACGGTGCAAC CAGCGTAGGCAACTACCTCATGCAATCCGTCACCCAAGGCCTACAATTCGGCGTTGCAGTAGCAGTAATCCTGTTCGGTG TTCGCACCATCTTAGGCGAACTCGTCCCCGCGTTCCAAGGCATCGCCGCCAAAGTAGTACCCGGCGCAATCCCAGCTCTC GACGCCCCCATCGTATTCCCCTACGCACAAAACGCAGTGCTCATCGGCTTTATCATGTCCTTCGTGGGCGGCCTGATCGG CCTCACAGTACTCTCCGTCTGGCTCAACCCAGCTTTCGGCGTAGCACTCATCCTGCCAGGACTCGTGCCGCACTTCTTCA CCGGCGGCACAGCTGGCGTATACGGCAATGCGACCGGCGGCCGACGCGGTGCCGCACTAGGCGGCCTCACCAACGGTTTA ATCATCACATTCCTGCCAGCATTCCCGCTGGGCGTTTTGGGCAACTTTGGTGATGCCAATACGACCTTCGGCGATGCCGA CTTCGGATGGTTCGGCATGCTCGTCGGCGGCGGCGCTCGCGTAGGTGGTCCGCTCGGCATCGTCCTAGTACTCTTAGTTG GTCTTGCAGTCTTCGCCTTAGGCTGGTTCTCTCAGGTCAAGCTGGTGCAGGGTAACTGGGATCCGACACCGTGGCGTGGC GGCTCTACTACAGCGGGTGCTGCTGGTCCTGCTGGTGCTGCTGCGGGTTCGGCCCAGGGTTTGACCCGTACATACCCGAA GGTCTTGCCACCGAAGGGCGCTCCGGTTCCACCGAGCCGCTAA Protein sequence : MNALIAIPEFLVNEILSVPAFLIGIITAVGLGAMGKKTGQVLGGAIKATLGFLLIGAGASLVVASLEPLGTMIQGATGAH GVVPTNEAIVGIAQNQFGGQVAWLMILGFAISLVLARITPMSYVFLTGHHVLFMATMLTMVLAAAGFGPWVVVPVGALLL GILMVSLPAIAHPWTRRVTGDDSIAIGHFGTAGYVAAGAVGKLVGGKKESMSASTEELKLPEGLRFLRDSMVATALSMAL MYVVLAILFILRAGQNEAFTAFANGATSVGNYLMQSVTQGLQFGVAVAVILFGVRTILGELVPAFQGIAAKVVPGAIPAL DAPIVFPYAQNAVLIGFIMSFVGGLIGLTVLSVWLNPAFGVALILPGLVPHFFTGGTAGVYGNATGGRRGAALGGLTNGL IITFLPAFPLGVLGNFGDANTTFGDADFGWFGMLVGGGARVGGPLGIVLVLLVGLAVFALGWFSQVKLVQGNWDPTPWRG GSTTAGAAGPAGAAAGSAQGLTRTYPKVLPPKGAPVPPSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 5e-63 | 47 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 4e-63 | 47 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 4e-63 | 47 |
