|
Name : DIP2013 (DIP2013) Accession : NP_940344.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Virulence Product : surface-anchored fimbrial subunit Function : - COG functional category : - COG ID : - EC number : - Position : 2066771 - 2068348 bp Length : 1578 bp Strand : - Note : Similar to Actinomyces naeslundii fimbrial subunit type 2 precursor SW:FM2_ACTNA (P12616) (534 aa) fasta scores: E(): 4.4e-20, 28.827% id in 503 aa, and to Actinomyces naeslundii type-1 fimbrial major subunit precursor FimP TR:Q9X4D8 (EMBL:AF107019) (533 DNA sequence : ATGACTGCACGGGGGTGTCGTCTGGCGACACTTGCAACGACTTTGACATTCTTTGTATCAAACGTCACACTTGCCTCAGT GTTTGCTGAAGAGTCACAGTATCATGCAGTCCAACTAGGAGAGAGTCCTCTCAGCGTTGACGGCCTTAGTATCCCAGAAC GTACGAGTATTGCCGTGCATGCATTGATGGGACTGCCTACGGGACAGCCGGCTAATGGTACAAAGCTCGATTCGATTGGC CTGCCAAAAGTAGATGGCATGTCGTTTACGCTCTACAGGGTTAACGAAATTGATCTGACTACGCAAGCGGGATGGGATGC GGCGTCGAAAATCAAGCTGGAAGAGCTCTATACAAACGGCCATCCAACCGACAAAGTAACCAAAGTCGCCACTAAGAAAA CCGAAGGCGGCGTGGCAAAATTTGATAACCTCACACCAGCCCTCTACCTCGTCGTTCAAGAGCTCAACGGCGCAGAGGCT GTGGTGCGTTCGCAACCGTTCTTGGTGGCAGCGCCACAGACAAACCCGACTGGCGACGGCTGGCTCCAAGACGTGCACGT GTATCCCAAGCACCAGGCTTTGTCTGAGCCGGTGAAAACTGCTGTGGATCCGGATGCCACGCAGCCTGGTTTCTCGGTGG GGGAGAACGTGAAGTATCGCGTGGCTACCAAGATTCCAGAGATCGCCTCGAACACTAAGTTCGAGGGTTTCACCGTGGCG GATAAACTCCCCGCTGAATTGGGCAAACCAGACACTAATAAAATAACGGTAACCCTTGGGGGAAAGCCGATTAATTCCAC CGACGTCTCTGTTCAAACCTATCAAGTCGGTGACCGCACCGTACTCAGCGTGCAACTAGCCGGCGCAACACTCCAGTCCT TGGACCAGCATAAAGATCAAGAACTAGTCGTCGAGTTTGAGGCACCTGTGACCAAGCAGCCAGAAAACGGCCAGCTAGAT AACCAAGCATGGGTACTACCGAGTAACCCCACTGCTCAGTGGGATCCAGAAGAAAGCGGCGATGCTGCGTTGCGCGGTAT GCCGTCGTCACGCGTGAGTTCCAAGTTCGGCCAGATCACGATTGAGAAATCCTTTGACGGCAACACCCCAGGTGCCGATC GCACCGCGACGTTCCAGCTGCATCGTTGCGAGGCCGACGGCAGCCTAGTCAAGTCCGACCCACCGATCTCCCTTGATGGC AAGCAGGAGTTTGTTACCGGCCAAGATGGTAAGGCCGTACTCAGCGGTATCCACTTGGGCACCTTGCAGCTCGAGTCCAA TGTTATGAAATATACCGACGCGTGGGCCGGCAAGGGAACCGAATTCTGCCTGGTAGAAACAGCTACTGCCAGCGGATATG AGCTGTTGCCTAAGCCAGTGATAGTAAAGCTGGAAGCCAACGAGTCTACCAACGTGTTGGTAGAACAAAAAGTAAAGATC GACAACAAGAAAAAGAACGCCGGATTTGAACTGCCACTCACAGGTGGTTCGGGGCGCATCGCCATCACTATCGGCATCGT TGGTTTGCTCGTCGCCCTCGCAAGCTATGTCTTATCGCGTAGGAAGGACAACCGCTAG Protein sequence : MTARGCRLATLATTLTFFVSNVTLASVFAEESQYHAVQLGESPLSVDGLSIPERTSIAVHALMGLPTGQPANGTKLDSIG LPKVDGMSFTLYRVNEIDLTTQAGWDAASKIKLEELYTNGHPTDKVTKVATKKTEGGVAKFDNLTPALYLVVQELNGAEA VVRSQPFLVAAPQTNPTGDGWLQDVHVYPKHQALSEPVKTAVDPDATQPGFSVGENVKYRVATKIPEIASNTKFEGFTVA DKLPAELGKPDTNKITVTLGGKPINSTDVSVQTYQVGDRTVLSVQLAGATLQSLDQHKDQELVVEFEAPVTKQPENGQLD NQAWVLPSNPTAQWDPEESGDAALRGMPSSRVSSKFGQITIEKSFDGNTPGADRTATFQLHRCEADGSLVKSDPPISLDG KQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETATASGYELLPKPVIVKLEANESTNVLVEQKVKI DNKKKNAGFELPLTGGSGRIAITIGIVGLLVALASYVLSRRKDNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP2013 | NP_940344.1 | surface-anchored fimbrial subunit | Not tested | Not named | Protein | 0.0 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DIP2013 | NP_940344.1 | surface-anchored fimbrial subunit | VFG2201 | Protein | 0.0 | 100 |
