Gene Information

Name : DIP2012 (DIP2012)
Accession : NP_940343.1
Strain : Corynebacterium diphtheriae NCTC13129
Genome accession: NC_002935
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase-like protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3764
EC number : -
Position : 2065901 - 2066770 bp
Length : 870 bp
Strand : -
Note : Similar to Actinomyces viscosus sortase-like protein SWALL:Q9AJ92 (EMBL:AF106034) (387 aa) fasta scores: E(): 2.7e-39, 43.47% id in 276 aa, and to Bifidobacterium longum NCC2705 sortase-like protein BL0676 SWALL:AAN24497 (EMBL:AE014690) (328 aa) fasta sco

DNA sequence :
ATGAGGCACCGGGCAGGTGAACATCGAAACGTTTTTGCCATCCTCGCATTCGTCATCGCGATCGTCTCAGTGGGATTTTT
GCTCTACCCCGTGGCCGCAACCGCATGGAACAACGCGCGCCAAGCACGCGTCGCACAGTCCTACGAGAACAGCTACGAGG
TAGACAGCCCAGCGGTACGAGACAGCGTTCTTGAGGCGGCCAGACAGTACAACACGTCGGTAGTAGGCTTCCCGATCCTC
GATCCGTGGCTGAACAGGGCGTCGAAAAACAGCGGGCCATACCTCGACTACCTGCAACAACTCAACCCGCAGCGCGCCGA
ACGTCCCGTCATAGCGTCGATAAGCATCCCTACTATCGACGCCCACCTGCCCATCTACCACGGCACCGACACCGCCACCC
TCGAGCACGGACTCGGCCACCTATACGGCTCCGCGCTACCCGTTGGCGGCACCGGCACCCACCCCGTGATCACCGGACAC
AGCGGCCTTGCCAACGCCACCCTCTTTGACAACCTCGAAGACGTCAAAGAACACGACCCCATCTACATCACCGTCCAAGG
CGAAACCCTCAAATACGAAGTAGACGCCATCAACGTAGTCCTACCCGAAGACACCAAACTCCTCGCCCCAGACCCCAACA
AAGACCAAATAACACTCATCACCTGCACCCCCTACGCCGTCAACTCCCACCGACTCCTCGTACGAGCCCACCGCGTAGAC
CTCGACCCCAACGACCCCAACCTCACACAAACCGGCACCAAAATCTGGCAACCCTGGATGCTGTGGACCGCAGCCCTAGC
ACTCACCGCCATCGCCATCATCATCACCCTCGTGCTTCGCAGGAAGAGGACAACCACCCATGAAAAATAA

Protein sequence :
MRHRAGEHRNVFAILAFVIAIVSVGFLLYPVAATAWNNARQARVAQSYENSYEVDSPAVRDSVLEAARQYNTSVVGFPIL
DPWLNRASKNSGPYLDYLQQLNPQRAERPVIASISIPTIDAHLPIYHGTDTATLEHGLGHLYGSALPVGGTGTHPVITGH
SGLANATLFDNLEDVKEHDPIYITVQGETLKYEVDAINVVLPEDTKLLAPDPNKDQITLITCTPYAVNSHRLLVRAHRVD
LDPNDPNLTQTGTKIWQPWMLWTAALALTAIAIIITLVLRRKRTTTHEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 9e-125 100
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-52 50
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 5e-56 49
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-55 48
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-55 47
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-40 45
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-45 43
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-42 42
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-47 41
srtH YP_005126713.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-36 41