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Name : clpC (DIP1983) Accession : NP_940314.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2030233 - 2032884 bp Length : 2652 bp Strand : - Note : Similar to Bacillus subtilis negative regulator of genetic competence ClpC SW:CLPC_BACSU (P37571) (810 aa) fasta scores: E(): 2.6e-134, 58.11% id in 826 aa, and to Mycobacterium tuberculosis probable ATP-dependent Clp protease ATP-binding subunit Rv3596c DNA sequence : TTGAAGGGTGTGAACATGTTCGAGCGGTTTACCGATCGTGCACGTCGCGTTATCGTTCTGGCACAGGAAGAAGCGCGCGG CCTCAATCACAATTACATCGGCACCGAGCACATCCTGCTCGGACTTATTCACGAGGGTGAGGGCGTGGCCGCTAAGGCGC TCGAGTCCATGGGCATCTCCCTTGAAGCAGTACGCCAAGAGGTAGAAGAAATCATCGGCCACGGCTCCGAGCCACCAGCT GGCCACATTCCTTTTACTCCACGTGCCAAGAAGGTACTTGAGCTCTCCTTGCGTGAGGGTCTGCAGATGGGACATAAGTA CATCGGTACTGAGTTCCTGCTGCTCGGCCTTATCCGTGAGGGCGACGGCGTAGCCGCACAAGTTTTGGTCAAGCTCGGCG CTGACCTGCCCCGTGTACGCCAGCAGGTTATCCAGCTTCTTTCCGGCTATGAGGGGGGCGAAAGCCCAGAAAACAATAAC GAGGGCGAGGCTGTGGGTGCTGGTACTGGCGCTGGCCGTGCTGGCCGCGGTGGTGGCGCAGGCGAGCGCTCCAACTCCTT GGTTTTGGACCAGTTTGGTCGCAACCTCACCCAGGCTGCTAAGGAAGGCAAGCTGGATCCTGTGGTGGGTCGTGAGCAGG AAATTGAGCGCATCATGCAGGTGCTCTCACGTCGTACCAAGAACAACCCAGTTCTTATCGGTGAGCCAGGTGTTGGTAAG ACCGCTGTTGTAGAAGGCCTAGCTCTAGACATCGTTAACGGCAAGGTGCCAGAAACGCTGAAAGACAAGCAGGTTTACTC TCTTGACCTCGGCTCCTTGGTGGCAGGTTCGCGCTACCGTGGTGACTTCGAAGAGCGCCTGAAGAAGGTTCTCAAGGAGA TCAACCAGCGTGGCGACATCATCTTGTTCATCGATGAGATCCACACCCTCGTCGGTGCCGGTGCCGCAGAAGGCGCTATC GACGCTGCCAGCTTGCTCAAACCTAAACTGGCTCGTGGTGAGCTACAGACCATCGGTGCTACCACTTTGGACGAGTACCG CAAGCACATCGAAAAGGACGCCGCACTTGAGCGTCGTTTCCAGCCAGTGCAGGTTCCAGAGCCTTCCGTCGATATGACCA TCGAGATCCTCAAGGGGCTACGCGACCGCTACGAGGCACACCACCGCGTCTCCATCACCGATGGGGCTCTCGCAGCAGCA GCACAGCTGTCCGATCGCTACATCAACGATCGCTTCTTGCCAGATAAGGCTGTTGACCTTATCGACGAAGCCGGCGCACG CATGCGTATCAAGCGCATGACCGCACCGGAATCCATCCGCAAGGTAGACGATCAGATCGCGGAAGTCCGTCGTGAGAAGG AAGCCGCAATCGATGCCCAAGACTTTGAAAAGGCCGCTGGCCTGCGCGACACCGAGCGCAAGTTAGGTGAAGAGCGCGCT GAGAAAGAAAAGCAGTGGCGCTCCGGCGACCTAGAAGACATCGCCGAGGTCGGCGAGGAGCAAATCGCTGAGGTGCTGGG CAACTGGACTGGTATCCCAGTGTTCAAGCTGACCGAGGAAGAATCCTCCCGTCTGCTGCACATGGAAGAGGAGCTACACA AGCGCATCATCGGCCAAGACGATGCCGTCAAGAGTGTTTCTCGCGCCATCCGCCGCACCCGCGCTGGCCTCAAGGACCCA CGCCGTCCTTCCGGCTCCTTCATCTTCGCCGGCCCATCTGGCGTGGGTAAGACCGAGCTATCCAAGTCACTGGCCAACTT CCTGTTCGGCGACGACGACGCCCTAATCCAGATCGACATGGGCGAGTTCCACGACCGCTTCACCGCGTCCCGTCTGTTCG GTGCCCCTCCAGGATATGTGGGCTACGACGAGGGCGGTCAGCTCACCGAGAAGGTCCGCCGCAAGCCATTCTCCGTGGTG CTTTTCGACGAAATCGAAAAGGCGCACAAGGAGATCTACAACACCTTGCTGCAGGTCCTCGAAGAAGGTCGCCTCACCGA CGGCCAAGGCCGCGTGGTGGACTTCAAGAACACCGTGCTGATCTTCACCTCCAACCTGGGTACCCAAGACATCTCTAAGG CTGTGGGCATGGGCTTTAGCTCTGTCGGCGAGCACGATGCCGATGGCCAGTACGACCGCATGAAGCAGAAGGTCAACGAC GAGCTAAAGAAGCACTTCCGCCCTGAGTTCCTCAACCGTATCGACGAAATCGTGGTATTCCACCAGCTCACCCAAGAGCA GATCGTCGAAATGGTGGACCTGCTCATCGGACGCGTATCCAAGGCACTTGCTCAAAAAGACATGGGCATCGAGCTCACCG AAAAGGCCAAGAACCTGCTGGCAAAGCGTGGATTCGATCCAGTACTGGGTGCACGACCATTGCGTCGCACCATCCAGCGC GAGATCGAAGACGTACTCTCCGAGAAGATCCTCTTCGGTGAGGTCGGCGCTGGTGAGATCGTCACCGTGGATGTTGAAGG CTGGGACGGCGAATCCAAGGAAACCGACAAGGCTTCCTTCACCTTCACCCCACGCGTGAAGCCGCTGCCAGACGAGTTCG AAGAGGCAACCCCATCTGAGGAAGCTCAAGAAGCAGTGATTAACGCTGCTGAGACTGAGGTTCCAGAAGAAGAAGTCAAC ATCGAAAACTAA Protein sequence : MKGVNMFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGSEPPA GHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVIQLLSGYEGGESPENNN EGEAVGAGTGAGRAGRGGGAGERSNSLVLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGK TAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAI DAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDRYEAHHRVSITDGALAAA AQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKLGEERA EKEKQWRSGDLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRTRAGLKDP RRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV LFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGMGFSSVGEHDADGQYDRMKQKVND ELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGARPLRRTIQR EIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLPDEFEEATPSEEAQEAVINAAETEVPEEEVN IEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 99 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_940314.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpC | NP_940314.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 4e-150 | 50 |
