Gene Information

Name : DIP1886 (DIP1886)
Accession : NP_940223.1
Strain : Corynebacterium diphtheriae NCTC13129
Genome accession: NC_002935
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1929844 - 1930593 bp
Length : 750 bp
Strand : -
Note : Similar to Streptomyces coelicolor ABC transport system ATP-binding protein SCE41.20c TR:Q9F2N9 (EMBL:AL442120) (262 aa) fasta scores: E(): 9.4e-54, 63.9% id in 241 aa, and to Streptomyces coelicolor ABC transporter ATP-binding protein SCE25.30 TR:Q9KZ60

DNA sequence : 
ATGACTGAGAACGGCCATTCGCTACCAGCTGCTCGTGCTAAGGGCCTTGTGAAAACCTACGGCCAAGATGAGACTCGCGT
CGTGGCCTTGGATTCTATTGATGTGGAGTTTGCAGCTCATCAATTTACTGCCATTATGGGACCTTCTGGTTCTGGTAAAT
CGACTCTAATGCATTGTATGGCGGGTTTGGATTCGATCTCCAGTGGTAGCACCTTTATTGGCGATACTGATCTTTCATTG
CTTAAGGATAAGGAGATGACGGCTCTTCGCCGTGATCGTCTTGGCTTTATTTTCCAGTCATTTAACTTGGTGCCCACTCT
TACTGCGGCGGAAAATATTACGTTGCCGCGTGATATTGCGGGTAAGTCGGTCAATAAGGAGTGGTTCGATGAGGTGACGT
CGCGCCTCGGTTTGACGGAGCGTCTGAGCCACCGTCCTTCTGAGTTGTCTGGTGGTCAGCAGCAGCGTGTGGCGTGTGCT
CGTGCGTTGGTTGCGCAGCCGGAGATCATTTTTGGTGATGAGCCTACGGGTAATTTGGATTCGAATTCTTCGGCTGAGGT
GTTGTCGATTCTTCGGACTGCGGTTGATCAGGATGATCAGACTGTGGTGATTGTGACCCATGATCCTCGTGCGGCATCGT
ATGCGGATCGTGTGGTGTTCTTGGCTGATGGTCGTATTGTCAAGGAGCTTATGCATCCGACAGCTGAGGAAATTTTGTCC
ACGATGGCAACCATTGAGGAGCTTGCATAG

Protein sequence : 
MTENGHSLPAARAKGLVKTYGQDETRVVALDSIDVEFAAHQFTAIMGPSGSGKSTLMHCMAGLDSISSGSTFIGDTDLSL
LKDKEMTALRRDRLGFIFQSFNLVPTLTAAENITLPRDIAGKSVNKEWFDEVTSRLGLTERLSHRPSELSGGQQQRVACA
RALVAQPEIIFGDEPTGNLDSNSSAEVLSILRTAVDQDDQTVVIVTHDPRAASYADRVVFLADGRIVKELMHPTAEEILS
TMATIEELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DIP1886 NP_940223.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-36 45
DIP1886 NP_940223.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-29 45
DIP1886 NP_940223.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-42 44
DIP1886 NP_940223.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-33 41