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Name : DIP1743 (DIP1743) Accession : NP_940081.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1787074 - 1788516 bp Length : 1443 bp Strand : + Note : Similar to Streptomyces coelicolor oligopeptide ABC transporter ATP-binding protein SCBAC1A6.35c TR:Q9ADF2 (EMBL:AL589708) (585 aa) fasta scores: E(): 1.2e-33, 44.29% id in 526 aa DNA sequence : ATGACCTTGCTGAACATGTCCAACGTTCAGATCATGGACGTTGTCCAAGCCCTATCTCTGTCTATCGAACGCGGCGAACG CGTCGGCCTGATCGGGGAATCTGGCTCGGGTAAAACCATCACCGCGATGTCTATCCTGCGGTTAATTCCCTCAAGCGGCA GCATTGTATTCGATGGTGCTGATATCCAAGGGCTCAGCGAAAAACAAATGTGTGCCCTGCGTGGAAAGCGCATCTCCATG GTGTTCCAAGAACCCATGACAGCGCTCGATCCGCTGATGAAAGTGGGAACCCAGATCAGTCACGCCATCAGGATTCACTC CTCAGTATCTCGTGCTCAAGCCCGCAAAAAGGCGGACGCTTTGCTGCACAGTGTTGAACTTGATCCCGAGCTGCGATCGC GCTACCCACACGAGCTTTCCGGCGGGCAACGCCAACGCATACTCATTGCCATGGCGCTCGCCCACGATCCTGATTTGCTC ATTTGCGACGAGCCCACCACAGCCTTGGATGTGACTTCCCAAAAAGCAATCGTGGATCTCATTTTGAGACTCGTCGCCGA ACGCGGCACCGGATTGCTATTTATTACCCACGACCTGGGGCTTGTGGCACGCACCTGTGAACGTGTGCTCGTCATGCGCG AGGGGCGCATTATTGAATCGGGCACGGTTGAAGACGTATTGAAAAACCCGCGTGAAGACTACACCGCCATGCTCGTCCAA GCATCGACACTAGCTCCTGCACCCCAGGTAGCGCTTAGTGACGACGAAGTGCTGCACATCGACAATGTGACCAAAAAGTA TCGCGGCACCACAGCGGTCGAAGATGTGACTCTTACAGTTCACCGTGGCGAACGCCTCGGAATCGTTGGTGGCTCCGGCT CCGGAAAAACCACCCTGCTGAAAATGATCTCAGGACTTAGCTCTCCTACCAGCGGACACATTAACACTGAAGGATCTATG CGCATTGTCTTCCAAGACCCCATGCAATCCCTCGACCCCCACATGTCCATCGCCGACATCGTATCCGAGCCACTAGGGCA TCGGGACCTCAAGGCTGTGGAACGTGCGCTCGAAGAAGTGGGGCTCGATGCAGGCATGATGAATCGTTTGCCTCATGAGT TTTCCGGTGGTCAGCGTCAACGCATTTCTATTGCGCGTGCGCTCGTGTCCTCCCCCGACATTTTGCTTGCCGACGAACCC GTCTCAGCACTCGATGTTTCCGTGCGAGCCAAAGTGCTAGCCCTCCTCGACCGATTGGTCAGCGAACGCCACCTCACCAT GCTTTTTGTCTCGCACGACCTGCACGTGGTGCGGTCCCTTTGCACCACCGTCGCGGTCATGCGAGAAGGAAAAATCGTAG AATACGGCCCCACCGAGGATGTGTTTAACAATCCTCAACACGAGTACACAAAGGCACTCATCGAGGCGATCCCTAGCCTT TAA Protein sequence : MTLLNMSNVQIMDVVQALSLSIERGERVGLIGESGSGKTITAMSILRLIPSSGSIVFDGADIQGLSEKQMCALRGKRISM VFQEPMTALDPLMKVGTQISHAIRIHSSVSRAQARKKADALLHSVELDPELRSRYPHELSGGQRQRILIAMALAHDPDLL ICDEPTTALDVTSQKAIVDLILRLVAERGTGLLFITHDLGLVARTCERVLVMREGRIIESGTVEDVLKNPREDYTAMLVQ ASTLAPAPQVALSDDEVLHIDNVTKKYRGTTAVEDVTLTVHRGERLGIVGGSGSGKTTLLKMISGLSSPTSGHINTEGSM RIVFQDPMQSLDPHMSIADIVSEPLGHRDLKAVERALEEVGLDAGMMNRLPHEFSGGQRQRISIARALVSSPDILLADEP VSALDVSVRAKVLALLDRLVSERHLTMLFVSHDLHVVRSLCTTVAVMREGKIVEYGPTEDVFNNPQHEYTKALIEAIPSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-157 | 66 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-157 | 66 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 8e-157 | 66 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-157 | 66 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 9e-87 | 41 |
