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Name : xerD (DIP1186) Accession : NP_939543.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1184540 - 1185475 bp Length : 936 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGGGCTCAATAAGTAATATTGCTCGTCAATGGCTAACTCACTTAGCAGTGGAAAAAGGAGTTAGCGATAACACATTGTC TAATTATCGTCGTGATCTTGAACGGTATACACGGTGGCTGCAAGTACAGGGAATCACAGATATTGAGAATATCTCCGCAC AAGATATTGAAAGATATGTTCAAGAGTTGCGTAAGGGGGATAGTGATACTGGAAAAAAACCTCTAGCTGCCTCATCTGCT GCGCGAGCTTTGATTGTTGCTCGTGGTCTACATCGTTTTGCATTGTTAGAAAACTTAGTGGAGAACGATGTATCTGCTGA TGTCTCTCCACCTGCAATGGGGCGTCACCTGCCTGATACCCTCTCAGTCGAGGAAGTGAATCGTCTAATAGAAGCTATAC CCATAGATGATGCGGCTTCGCCAGAAAATCTTAGGGATTGCGCTCTACTGGAGTTCCTCTATGCTACTGGAGCCCGCATT TCGGAAGCAGTAGGTCTAGTGGTGGACGACGTGGCTGCAATTGTCGAAAATGAAGGCATTGTCCGAATAACTGGAAAGGG CAACAAACAGCGTATTGTGCCTGTTGGTGATCAGTGTTTGTCAGCGCTCGAGCGATATGTCGTGAGAAGCAGACCGGCAA TGTCAAAAGGGAAATCGCACGCACTTTTCCTTAATAAACGTGGCGGACAATTATCTAGACAAAGCGCTTGGCAAATTCTC AAAAACTCAGCTCAACGCGCAGGAATTGAAAAAGATATTTCTCCACATACTTTGCGCCATAGTTTTGCCACTCATCTTTT AGAAGGTGGGGCTGATGTTCGAGTAGTACAAGAATTGTTAGGGCATTCGTCGGTCACAACTACACAGATATACACCCATG TAACTGCCGATAATCTACGATTTGTCTGGTCTCGTTCACATCCGCGTGCTCACTAA Protein sequence : MGSISNIARQWLTHLAVEKGVSDNTLSNYRRDLERYTRWLQVQGITDIENISAQDIERYVQELRKGDSDTGKKPLAASSA ARALIVARGLHRFALLENLVENDVSADVSPPAMGRHLPDTLSVEEVNRLIEAIPIDDAASPENLRDCALLEFLYATGARI SEAVGLVVDDVAAIVENEGIVRITGKGNKQRIVPVGDQCLSALERYVVRSRPAMSKGKSHALFLNKRGGQLSRQSAWQIL KNSAQRAGIEKDISPHTLRHSFATHLLEGGADVRVVQELLGHSSVTTTQIYTHVTADNLRFVWSRSHPRAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-37 | 44 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-37 | 44 |
