|
Name : DIP1060 (DIP1060) Accession : NP_939421.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Virulence Product : iron-siderophore uptake system transmembrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4779 EC number : - Position : 1038768 - 1039727 bp Length : 960 bp Strand : - Note : Similar to Streptomyces coelicolor iron-siderophore uptake system transmembrane component sci51.26C TR:Q9S214 (EMBL:AL109848) (375 aa) fasta scores: E(): 5e-40, 40.74% id in 324 aa, and to Escherichia coli ferric enterobactin transport system permease fep DNA sequence : ATGCGTGCACTCGTCATACTCTCCTCCCTCCTCCTAGTCACCGCGGCATACAGCTTGGTAATTCCCGGAGCCGGACTAAG CACTTGGCAGCTTCTCACCAGCGAAACCCCATTAGCACACACGGTTGTCATGCAGTGGCGCTTGCCTCGAGTGGTCACCG GAATCCTAGTAGGCGCAGCACTAGCCATAGCAGGATCACTATTCCAATCCCTCACACGCAACCCGCTCGGATCACCTGAC ATCATCGGATTTTCAACCGGCGCCTACACCGGCGTAATCGCAGCCTTCCTCCTTGGATGGTCAGGCTTTGGTGCCACCAT TGTCGGTGCGCTCATCGGCGGTCTAGCAGTTTCAGTCGTGGTGATCGCACTGTCAGTCCGAACGCGTATCGACGGCCTCC GCATCATCCTAGTAGGCCTAGGAATCTCAGCCATGCTCTCGGCCCTCAATAGGTGGCTAATCACCCGCGGAGAACTCGAC ACAGCACTGTCTGCTGCAAGTTGGGGTGCAGGCTCACTCAATGGACTCCGCTGGACCATAGCGATACCAGCCTGCTGTGT CCTAGCAATTCTTATCACCACAACCATTCCATTGCGGCGATTCCTCGATGTTCTTAGCCTAGGAGACGATCTCGCTGTAG GCCTCGGACTTCGATTGCAGTTAACCAAGCTCCTCCTCCTAGTCGGTGGAGTATTCCTCGTGGCAGCAACCACCGCTGTC GCAGGCCCCATCGCATTTGTGGCTTTGGCGTCTCCACACATTGCCCGTGCACTAACGTCGTCTGCACGAACCCCACTTGT AGAGACGTCGGTAATCGGCGCTTTGCTTATTATCGTTGCCGACCTCATCGGCCAGCGACTTTTCTATCCCACCCAGCTTC CTGTTGGCCTCGTCACCGTCACCATCGGTGGCATGTACCTGCTGTGGCTCATAGCCCGCGGCTCGAAGGAGAACTCATGA Protein sequence : MRALVILSSLLLVTAAYSLVIPGAGLSTWQLLTSETPLAHTVVMQWRLPRVVTGILVGAALAIAGSLFQSLTRNPLGSPD IIGFSTGAYTGVIAAFLLGWSGFGATIVGALIGGLAVSVVVIALSVRTRIDGLRIILVGLGISAMLSALNRWLITRGELD TALSAASWGAGSLNGLRWTIAIPACCVLAILITTTIPLRRFLDVLSLGDDLAVGLGLRLQLTKLLLLVGGVFLVAATTAV AGPIAFVALASPHIARALTSSARTPLVETSVIGALLIIVADLIGQRLFYPTQLPVGLVTVTIGGMYLLWLIARGSKENS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagB | YP_005680308.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 2e-52 | 61 |
| fagB | YP_005682398.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 1e-52 | 61 |
| fagB | YP_003782431.1 | integral membrane protein | Not tested | PiCp 1 | Protein | 1e-52 | 61 |
| fagB | YP_005684489.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 1e-52 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DIP1060 | NP_939421.1 | iron-siderophore uptake system transmembrane protein | VFG0928 | Protein | 5e-27 | 45 |
