|
Name : xerD (CT0602) Accession : NP_661502.1 Strain : Chlorobium tepidum TLS Genome accession: NC_002932 Putative virulence/resistance : Unknown Product : integrase/recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 603874 - 604788 bp Length : 915 bp Strand : - Note : identified by match to PFAM protein family HMM PF00589 DNA sequence : ATGCCAGAACGCGAGGAGCCGTGGCGGAAAACGCTCGAAACCTTCCTGAACTACCTGACCCTCGAACGCAATTTTTCGGG CAACACGCGCGCCTCGTACCTGAACGACCTTGGCCGCTACCTTGCCTGGCTGCACGAGTGCGGCGTCAAACCTGAAGAGG CCGCGCCGGGCGACATCCGGAAATTCATTCAGGAGCTGCATGAGATCGGCCTCGAAGCGAGTTCGATCGCCCGGAACATC TCTGCTATCCGCTCCTTCCACAAATTCCTGCTGACTGAGCGGCTCGCGACGATGAACCCCGCCGAGAACATCCACCAGCC GAAACTCGCCCGCTACCTCCCCTCAGTGCTGACCATCGAGGAGATGGCTACGCTGCTCGACGCCCCGCTCAAGCGGCATC CGACTAGCACTTTCATGCTGCGCGACAAGGCGATGCTCGAATTTCTCTACGCCACGGGAGTCCGCGTCAGCGAACTGCTG GGGCTCAGCCGACTGAATCTGCACATGGATGACGGCTTCGTGCGGGTCTTCGGCAAAGGATCGAAAGAGCGGCTTGTACC CGTCGGCCAGACGGCCATCTCGTGGATGAAACGCTACCTCGACGAGCTGCGCCCCGGCATGATGAGCGCAACCTCGCACG ACACTATTTTCCTGAACTCGCGAGGCGGCCCGCTCTCGCGCATGGCTGCGTGGAACATCGTGCGTGAGCACGCAGTCATC GCAGGTATTGAAAAACCGATCAGCCCGCACACCTTCCGCCACTCCTTCGCCACCCACCTGCTCGAAGGCGGCGCAGACCT GCGCGTTGTGCAGGAGATGCTCGGCCACAGCTCCATCATCGCCACCCAGATCTACACCCACATCGACCGCTCGTTCATCA AGGAAGTGCACAAAACATTCCACCCGCGGGGATAA Protein sequence : MPEREEPWRKTLETFLNYLTLERNFSGNTRASYLNDLGRYLAWLHECGVKPEEAAPGDIRKFIQELHEIGLEASSIARNI SAIRSFHKFLLTERLATMNPAENIHQPKLARYLPSVLTIEEMATLLDAPLKRHPTSTFMLRDKAMLEFLYATGVRVSELL GLSRLNLHMDDGFVRVFGKGSKERLVPVGQTAISWMKRYLDELRPGMMSATSHDTIFLNSRGGPLSRMAAWNIVREHAVI AGIEKPISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQIYTHIDRSFIKEVHKTFHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-48 | 45 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-48 | 45 |
