|
Name : CT0270 (CT0270) Accession : NP_661174.1 Strain : Chlorobium tepidum TLS Genome accession: NC_002932 Putative virulence/resistance : Virulence Product : carbohydrate isomerase KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 283088 - 283987 bp Length : 900 bp Strand : - Note : identified by match to PFAM protein family HMM PF00571 DNA sequence : ATGAGCGAGCGGCTGGACGAGAACTTTTCCAGAGCAATCGATCTGATGCTCGCCTGCACAGGCAAGATCATCATCTCCGG CATGGGCAAATCGGGCATCATCGGCCAGAAGATCGCGGCGACGCTCTCATCGACCGGCACCACGGCGATTTTCCTCCATC CGGCGGAAGCAGCGCACGGCGACCTCGGCGTGGTTTCGGAGGGCGACACGGTCATCTGCCTTTCCAAAAGCGGCATGACT GAGGAGCTGAACTTCATTCTCCCGGCGCTCCGGGAGCGGAAGGCGACCATCATCGCCTTCACCGGCAACCCTCGTTCCTA CCTCGCGATGAACGCCGACGTGGTGCTCGACACCGGCGTCGAGCAGGAGGCGTGCCCTTACGACCTCGCGCCAACCAGCT CGACCACGGCGATGCTCGCGATGGGTGACGCGCTGGCGATCTGCCTCATGAAAAAGAAGAACTTCACCGACCAGGAATTC GCCCTCACCCACCCCAAAGGCTCGCTCGGCAAACAGCTGACGATGCGGGTCGGCGACGTGATGGCCACCGGCGATGCCCT GCCCGTCGTCAGCGAAGATGCAATGCTCTCGGACCTCATCCTCGAAATGACCTCCAAGCGCTACGGCGTCAGCGGCGTCG TGGATGCAGAGGGCAAGCTCACCGGCATTTTCACCGACGGCGACTTGCGGCGGCTGGTGCAGACCGGCGAGTCATTTCTC GACAAAAAAGCGGTCGAGGTGATGACCCCCAACCCGAAAACCGTCGCGCCCGACATGAAGGCCAAAGCCTGCCTCGAACT TCTCGAAACCCACCGCATCACCCAGCTTATGGTGTGTGATGAAAAGCGCTGTCCGGTGGGGATTGTGCATATCCACGATC TGGTAACACTGGGGTTGTAG Protein sequence : MSERLDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHGDLGVVSEGDTVICLSKSGMT EELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGVEQEACPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEF ALTHPKGSLGKQLTMRVGDVMATGDALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFL DKKAVEVMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-40 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-40 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-40 | 44 |
