|
Name : CT0230 (CT0230) Accession : NP_661134.1 Strain : Chlorobium tepidum TLS Genome accession: NC_002932 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 244017 - 245069 bp Length : 1053 bp Strand : - Note : identified by match to PFAM protein family HMM PF01370 DNA sequence : ATGAAAATCCTCGTTACCGGCGCTGCCGGATTCATCGGCTTCCATCTTTGCGAACGACTCGCGTCGAGGGGCGACGACGT GGTCGGCATCGACAACATCAACGACTACTACGACCAGCGGGTCAAGTACGGGCGTCTGGCGTACTCGGGCATCGCTGAAT CCGCCATCGAATACGGCAAAACCGTGCAGTCGTCGAAATATCCGAACTACCGTTTCGTCAAGCTCAATCTCGAAGACAAG GAGGGCATCGACAACCTCTTCAAGGCGGAGAAGTTCGACGCGCTCTGCAACCTGGCCGCCCAGGCGGGCGTGCGCTACTC GCTCACCAATCCCGCCTCCTACGTCAGCTCGAACATCGTCGGCTTCGTGAACCTCTTGGAAGCGGCCCGCCACAACAGCC TCGGCAACTTCTGCTATGCGTCAAGCTCATCGGTTTACGGCCTGAACGAACGCCAGCCCTTTTCGGTGCACGACAACGTC GATCACCCGGTCAGCCTCTACGCGGCCAGCAAAAAGTCCAACGAGCTGATGGCCCACACCTACAGCCACCTGTTCGGCAT TCCAACCACCGGCCTGCGCTTCTTCACGGTCTACGGCCCGTGGGGACGGCCCGACATGGCGCTCTTCCTCTTCACCAAAG CCGCGCTCGAAGGCCGCCCGATCGATGTCTTCAACTATGGCAACATGCAGCGCGACTTCACCTACATCGACGACATCGTC GAGGGCGTCGTGCGCGTGCTCGACCATCCGGCCCAGCCGAACCCCGACTGGAGCGGCGCGGCCCCCGATCCCGGCACCTC GTCCGCCCCGTACCGCGTTTACAACATCGGCAACAACAAGACGGTCAAGCTGATGGATTACATCGAAGCACTCGAAAACG CACTCGGTGTCACCATCGAAAAAAATCTGTTACCGATCCAGCCGGGCGACGTGCCTTCGACCTGGGCCAATGTCAGCGAC CTGGTCAAAGACTTTGACTACAAGCCCGAAACCACGGTGCAGGAGGGCGTCAACCGTTTCATCGCCTGGTACCGCGAGTT CTTCAAGGTCTGA Protein sequence : MKILVTGAAGFIGFHLCERLASRGDDVVGIDNINDYYDQRVKYGRLAYSGIAESAIEYGKTVQSSKYPNYRFVKLNLEDK EGIDNLFKAEKFDALCNLAAQAGVRYSLTNPASYVSSNIVGFVNLLEAARHNSLGNFCYASSSSVYGLNERQPFSVHDNV DHPVSLYAASKKSNELMAHTYSHLFGIPTTGLRFFTVYGPWGRPDMALFLFTKAALEGRPIDVFNYGNMQRDFTYIDDIV EGVVRVLDHPAQPNPDWSGAAPDPGTSSAPYRVYNIGNNKTVKLMDYIEALENALGVTIEKNLLPIQPGDVPSTWANVSD LVKDFDYKPETTVQEGVNRFIAWYREFFKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-95 | 58 |
