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Name : CT0227 (CT0227) Accession : NP_661132.1 Strain : Chlorobium tepidum TLS Genome accession: NC_002932 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 241914 - 243212 bp Length : 1299 bp Strand : - Note : identified by match to PFAM protein family HMM PF00984 DNA sequence : ATGGACAAAACAAGGATCGCATTGATCGGCCTGGGTTACGTCGGCCTGCCTCTCGCCGTCGAGTTCGCGAAAAAATTTCC GGTGGCCGGCTTCGACATCAAGCAGGAGCGGATCGAAGAGCTCAACAACGGGTGCGACTCGACGCTCGAAGTCGATGCGG AGGCGCTCGGCGCGGTGCTCACAGCGAGCAACCCGCTGACCGCCGATGGCGACAAGGGCCTCTTCGTCACCTCCTCGATC GCGGAGATCGCCAAAGCGAACATCTACATCGTCACCGTGCCGACACCGACCGACAAGCACAACCGCCCCGTGCTCACCCC GCTCATCCGGGCGAGCGAAACGGTCGGACAGGTGCTCGAAAAGGGGGACATCGTCATCTACGAATCGACCGTCTATCCCG GCGCTACCGAGGAGGATTGCGTGCCGGTGCTCGAACGGGTCTCGGGCCTCACGTTCAACCGGGACTTTTTCGTGGGCTAC TCTCCCGAACGGATCAACCCCGGCGACAAGGAGCACACGGTCACGAAAATCAAAAAGGTGACCTCCGGCTCCACGCCCGA AGCCGCCCGCAAAATCGACGAACTGTACGCTTCGGTCATCACGGCGGGCACGCACCTGGCCTCGTCGATCAGAGTCGCCG AAGCGGCCAAGGTGATCGAGAACTCCCAGCGCGACATCAACATCGCCTTCGTCAACGAGCTGGCGATGATCTTCAATCGC ATGGGCATCGACACGCTCGACGTGCTCCGGGCCGCCGGGACGAAGTGGAACTTCCTGCCCTTCCGGCCCGGTCTGGTCGG CGGCCACTGCATCGGCGTCGATCCCTACTACCTGGCGCAGAAGGCTCAGGAGTACGGCTACCACCCGGAGATCATTCTGG CGGGCCGCCGCCTGAACGACAACATGGGGCGCTACGTCGCCTCGGAGGTAGTCAAGCTGATGATTTCGCGCGACCTGAAG GTCAAAGGCTCAAAGGTGCTCATGCTCGGCATCACCTTCAAGGAGAACTGCCCCGACATCCGCAACACCCGCGCCGTGGA CATTGTGGCCGAACTGCGGGAGTACGGCGCGCAGGTGCACATTCACGACCCCTGGGCTAACCCGGAGGAGGTGCGACATG AATATGGACTCGACTGTATCGACGCGCCGGTCGAAGGCGGTTACGACGCCATCATTCTCGCCGTCGCGCACGCGGCGTTC GCGGAAATGGCCATCGGCAAACTCCGCTCTGGCGATAACGCCGTGATCTACGACGTGAAGGGCGTACTGCCAACCGACGC CATCGACGGCAGACTCTGA Protein sequence : MDKTRIALIGLGYVGLPLAVEFAKKFPVAGFDIKQERIEELNNGCDSTLEVDAEALGAVLTASNPLTADGDKGLFVTSSI AEIAKANIYIVTVPTPTDKHNRPVLTPLIRASETVGQVLEKGDIVIYESTVYPGATEEDCVPVLERVSGLTFNRDFFVGY SPERINPGDKEHTVTKIKKVTSGSTPEAARKIDELYASVITAGTHLASSIRVAEAAKVIENSQRDINIAFVNELAMIFNR MGIDTLDVLRAAGTKWNFLPFRPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDNMGRYVASEVVKLMISRDLK VKGSKVLMLGITFKENCPDIRNTRAVDIVAELREYGAQVHIHDPWANPEEVRHEYGLDCIDAPVEGGYDAIILAVAHAAF AEMAIGKLRSGDNAVIYDVKGVLPTDAIDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-118 | 61 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-118 | 61 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-103 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CT0227 | NP_661132.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 2e-118 | 61 |
