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Name : dnaB (CT0205) Accession : NP_661111.1 Strain : Chlorobium tepidum TLS Genome accession: NC_002932 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 218141 - 219676 bp Length : 1536 bp Strand : - Note : identified by match to PFAM protein family HMM PF00772 DNA sequence : ATGAAGCCGCGCGAACCGCAACTCGATTTGAGCCGTGACATCGACTTCAGCAAGGAGAGCCGGGTGCCCCCCTACTCGCT GGAGGTCGAACAGGAGGTGCTTGCCTGCATCCTGCTCGAAGACGATCCGATCGAACAGGTGATCCAGATTTTCGGCGACA ACGGCGAAGCGGTCTTTTACGAAAAGCGCCACCAGATCATCTACAAGGCGATGATGCTGCTCTACCAGAAGCGGCAGGCC ATCGACCTCATCACGGTAAGCGAAGAGCTGTCGCGCATAGGCGAGCTGGAGAACATCGGCGGACGCCCCTACCTCGGCGA ACTTTCGGGAAAGGTGATCAGCTCGGCGAACATCGAGTTCTACGCCCGGCTGGTGAAGGAGAAATACCTCTACCGGCGGT TGATCTCGATTTCGTCGCACATTTCGAGCGCAGCCTACAACACCTCGATGGACATCTTCGATCTGGTCGAAAACGCCTCG CAGCAGTTCTTCAACATCTCGCAGGCGGGTGTCAAGAAAAAGGCCACCAGCATCAAGGAGTTGCTCAAAACCGCCACGAG AATGATCGAGAATCTCGGCTCGTCACACTCGTCGGTCACGGGCATCGGATCCGGATTTTCGGAACTCGACGAGTACACGG CGGGCTTCCAGCCGTCGGACATGATTATCATCGCCGCCCGTCCGTCCGCCGGTAAAACCGCCTTCGCGCTGGCACTGGCG CGAAACGCGGCGGTGAACTTCAACACGCCGGTGCTCTTCTTCAGCCTCGAAATGGCGGAGATTCAGCTCGCGCTCAGGCT GATGTGCGCCGAAGCCTACGTCGAGTCGCAGCTCGTGAGGCGCGGCCAGATTTCGCCGGAGATGATGAACAAGATCATCA ACAGCATGGACGCGCTGGCCGACGCCAAGCTCTTCATCGACGACACGCCGGGCATCTCGATCATGGAGCTGACCGCCAAG ACCCGCCGCATGAAGCAGGAGCATGGCATCGGCATGGTGGTGGTTGACTACCTCCAGCTCGTCACGCCGGTCAGGGACGG GCGCTCGAACCGCGAGCAGGAGATCGCGCAGATTTCTCGCTCGCTCAAGGCGCTCGCCAAGGAGCTGAACATTCCGGTGA TCGCGCTGGCGCAGCTCAACCGCTCGGTCGAACAGCGCTCCGGCGACCGCCGGCCTCAGCTCAGCGACCTTCGCGAATCC GGCTCGATCGAGCAGGACGCCGATATGGTGATATTCCTGTCGAGACCGGAGATGTACGGCATCAAGAACTTCGAGGATGG CTCCTCGACCAAGGACATAACCGAGGTGGTCATCGGCAAGCAGCGAAACGGCCCGATCGGCACGGTCAGGCTGCTTTTCC TGAAAAAGTACGGGCGCTTCCAGTCCACGGCCAACAGCTACCTGACAGCCGCCGATAGCGGACAGCAGCAGCCAGAACCC GCCCGTGGAGATGGCTATCCGGAGGCATCCCTGCCGGAGCCGCCGCCGCTCGATATGGACAGCTTTATCAACAATTCGGA CGCCGCACCCTTTTAA Protein sequence : MKPREPQLDLSRDIDFSKESRVPPYSLEVEQEVLACILLEDDPIEQVIQIFGDNGEAVFYEKRHQIIYKAMMLLYQKRQA IDLITVSEELSRIGELENIGGRPYLGELSGKVISSANIEFYARLVKEKYLYRRLISISSHISSAAYNTSMDIFDLVENAS QQFFNISQAGVKKKATSIKELLKTATRMIENLGSSHSSVTGIGSGFSELDEYTAGFQPSDMIIIAARPSAGKTAFALALA RNAAVNFNTPVLFFSLEMAEIQLALRLMCAEAYVESQLVRRGQISPEMMNKIINSMDALADAKLFIDDTPGISIMELTAK TRRMKQEHGIGMVVVDYLQLVTPVRDGRSNREQEIAQISRSLKALAKELNIPVIALAQLNRSVEQRSGDRRPQLSDLRES GSIEQDADMVIFLSRPEMYGIKNFEDGSSTKDITEVVIGKQRNGPIGTVRLLFLKKYGRFQSTANSYLTAADSGQQQPEP ARGDGYPEASLPEPPPLDMDSFINNSDAAPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 8e-63 | 41 |
