Gene Information

Name : CT0194 (CT0194)
Accession : NP_661100.1
Strain : Chlorobium tepidum TLS
Genome accession: NC_002932
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 205094 - 205756 bp
Length : 663 bp
Strand : +
Note : identified by match to PFAM protein family HMM PF00072

DNA sequence : 
ATGCGCGTGCTGCTTGTCGAGGATGATCCCATGATTGCCGAGGCGGTTTCGGTGGCGCTGAAGGATGCGGCGTATGCGGT
GGACTGGGTGCGCGATGGCGAGAAGGCTGCCGACGCGCTTCGTTATGGCGAGCATCAGGCCGTGCTGCTCGACCTGGGGC
TTCCGGGGCGCGGCGGTCTGGAGGTGCTCGCGGCGCTTCGGGAGGGCGGGAGTTCGATTCCCGTCATCATCATCACCGCC
CGCGACGGTCTCGGCGAGCGCATCGCGGGGCTGGATTCGGGCGCGGACGATTATCTCGTCAAGCCGTTTGATCTCGATGA
ACTGCTGGCGCGGCTCCGGGCGGTGATCCGGCGTCAGGGCGGGCAGGCTTCGGGGCTGATCGGCAATGGCCAGATCACGC
TCGATCCCGCCACGCACACAGCATTCTGCGGCGAGGAGCGGGCCGTGCTCAGCTCGCGCGAGTTCGCGGTGCTGCACGCG
CTTCTGCTCCAGCCGGGCCGCATCCTGAGCCGCTCGGCGCTCGAAGAGCGGGTCTATGGCTGGGACGAGGAGGTCGAGAG
CAACGCCATCGATTACCTGATCCACCAGCTCCGCCGCAAGCTCGGCGCGACGAGCATCAAAAACATACGGGGTGCGGGAT
GGATGGTCGAAAAACAGCCATGA

Protein sequence : 
MRVLLVEDDPMIAEAVSVALKDAAYAVDWVRDGEKAADALRYGEHQAVLLDLGLPGRGGLEVLAALREGGSSIPVIIITA
RDGLGERIAGLDSGADDYLVKPFDLDELLARLRAVIRRQGGQASGLIGNGQITLDPATHTAFCGEERAVLSSREFAVLHA
LLLQPGRILSRSALEERVYGWDEEVESNAIDYLIHQLRRKLGATSIKNIRGAGWMVEKQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-29 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CT0194 NP_661100.1 DNA-binding response regulator BAC0487 Protein 4e-29 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CT0194 NP_661100.1 DNA-binding response regulator VFG0473 Protein 9e-34 41