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Name : tkt (CT1870) Accession : NP_662747.1 Strain : Chlorobium tepidum TLS Genome accession: NC_002932 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1767153 - 1769219 bp Length : 2067 bp Strand : + Note : identified by match to PFAM protein family HMM PF00456 DNA sequence : TTGACTGTCAGAGTCCGTCCGATTTCTCTCAATCTCAGAAACAATCCGATTATGACACGCACCCGTTCCATCGATGAAGA GGCCGTCGCCACCATCAGGCTTCTGGCGGTCGATATGGTAGAAAAGGCCAAATCGGGCCACCCTGGACTGCCGCTTGGTG CGGCTCCGATGGCGTACACGCTCTTTACCAAAATCATGCGGTTTAACCCCGCCAATCCGGAGTGGCCGAATCGCGACCGC TTCGTGCTCTCGGCGGGCCACGGCTCCGCGCTGCTCTACTCCATGTTGCACCTCTGCGGCTACGGCCTCGGCATGGATGA GCTGAAGCAGTTCCGGCAGCTCGGCAGCCGCACGCCTGGCCACCCCGAATACGGTCACACGCCGGGCGTCGAAACGACCA CTGGCCCGCTCGGCCAGGGCATTGCCACTGCCGTCGGAATGGCTGCCGCCGAACGCTTCCTCGCCACGAAACTCAACACG GCAGAGCGGGCACTCATCGACCACTTCACCTACGTCATCTGCGGCGACGGTGACCTCATGGAGGGCATCAGTTCGGAAGC CTCGTCGCTTGCCGGACACCTCAGGCTCGGGCGCCTCATCTGCCTCTACGACAGCAACCACATCAGCATCGAAGGCTCGA CCGGTCTGGCCTTCACGGAGGATGTTGCCCGCCGCTACGAGGCGTACGGCTGGCACGTCCTGTCGCACATCGACGGCAAC GACCTTGCGGCCATCGAGCAAGCAGTGCGCAATGCACAGGAGATCGACGACCGCCCGTCGCTCATCATCGTCAACACCAC CATCGGCTACGGTAGCCCGCACAAGCAGGGCACCGCGTCAGCACACGGCGAGCCGCTTGGCCCGGAAGAAACGAAGCTGG TCAAGCAGGCTTTCGGGTTTGATGAAAATGAATCGTTCGTCGTGTCGGATCGTGTGTACGACCATTTTCACGCGATAGCC GAACGCGGCGCGGCGCTCGAAGCCGAATGGCAAACGCAGTGGCAGTCGTTCAGGCAGGAAGAACCCGGCCTCGCCTCGGC GCTGACCGACCTGCTCGCGGGCCGCTTCCCTGAATCGTGGCTGCCCGAAATGCCGAAATTCACGACTGGCGAAAAGCTCG CCACGCGGCAGGCATCGAAAAGCGTGCTTGCCAAAATCGCAGAAAAGGCGCCGCTGCTGGCGGGCGGCTCGGCTGACCTC GCCCCGTCGAACGGCACGCTCATCGGAGCCGCTTTCGAGGCTGGAAGCTACGGCGGCTCGACCTTCCACTTCGGCGTTCG GGAACACGCAATGGGCGCACTTGTCAACGGCATGGCACTCTCAAAAATGATGATCCCCTATGGCGCGACCTTCCTCGTCT TTGCCGATTACATGAAACCCGCGCTGCGCATCGCCGCAATGATGCAATCCCCCTCGATCTTCATCTTCACGCACGACAGC ATCGGCCTTGGCGAGGACGGCCCAACCCACCAGCCCATCGAGCAGCTCGCCATGCTCCGCGCCATGCCGGGCTTCGACGT CTATCGCCCGGCGGACGCGAATGAAACGGCAGCGGCGTGGCTGCTCGCGCTGAAACGCCGCAAACCGGCAGCGCTCGTGC TCACACGCCAGGGTTTGCCAGTGCTCGACGACGCCGATGGACGCCTCCGCAACGGCGTGACAAAAGGCGGCTATGTGCTC GCGGAATGGGCAGATACGGACGACGACGACGACCGCCGGATCATTATCGTGGCGACGGGATCGGAGGTGCATCCCGCGCT CGAAGCAAAAACGCTGATCGAACAGGAGGGATTCGCGGCACGGGTGGTCTCGATGCCGTCGCGGGAGCTGTTCGCCGAGC AACCGGCGGAGTATCGCGCCGCCGTGCTGCCTCCGACGGTGCGGGCACGAGCCGTGGTCGAAGCCGCCGCGACCTTCGGC TGGCACGACATTGCGGGCGACGGCGGAATCGTGATCGGCATCGACCGCTTCGGCATGTCAGCCCCCAGCTCGCAGGTGAT GGAGCACTTCGGCTTCACGGCGGAAAACATCGCCGCCCGCGCCCTCGAACTCCTGAACCGGAAATGA Protein sequence : MTVRVRPISLNLRNNPIMTRTRSIDEEAVATIRLLAVDMVEKAKSGHPGLPLGAAPMAYTLFTKIMRFNPANPEWPNRDR FVLSAGHGSALLYSMLHLCGYGLGMDELKQFRQLGSRTPGHPEYGHTPGVETTTGPLGQGIATAVGMAAAERFLATKLNT AERALIDHFTYVICGDGDLMEGISSEASSLAGHLRLGRLICLYDSNHISIEGSTGLAFTEDVARRYEAYGWHVLSHIDGN DLAAIEQAVRNAQEIDDRPSLIIVNTTIGYGSPHKQGTASAHGEPLGPEETKLVKQAFGFDENESFVVSDRVYDHFHAIA ERGAALEAEWQTQWQSFRQEEPGLASALTDLLAGRFPESWLPEMPKFTTGEKLATRQASKSVLAKIAEKAPLLAGGSADL APSNGTLIGAAFEAGSYGGSTFHFGVREHAMGALVNGMALSKMMIPYGATFLVFADYMKPALRIAAMMQSPSIFIFTHDS IGLGEDGPTHQPIEQLAMLRAMPGFDVYRPADANETAAAWLLALKRRKPAALVLTRQGLPVLDDADGRLRNGVTKGGYVL AEWADTDDDDDRRIIIVATGSEVHPALEAKTLIEQEGFAARVVSMPSRELFAEQPAEYRAAVLPPTVRARAVVEAAATFG WHDIAGDGGIVIGIDRFGMSAPSSQVMEHFGFTAENIAARALELLNRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 4e-121 | 46 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-119 | 46 |
