Gene Information

Name : serB (CT0173)
Accession : NP_661079.1
Strain : Chlorobium tepidum TLS
Genome accession: NC_002932
Putative virulence/resistance : Unknown
Product : phosphoserine phosphatase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0560
EC number : -
Position : 180464 - 181687 bp
Length : 1224 bp
Strand : -
Note : identified by match to PFAM protein family HMM PF00702

DNA sequence :
ATGCACGAACTGCTGCTCATCAACATTTCCGGGCCGGACAAGCCGGGCCTGACCTCCAAAATTACCGAAGTGCTTGCACG
ATACAACGTGCCGGTGCTCGACATCGGCCAGTCGGTCATTCACAACCACCTCTCGCTCGGGATGCTCATCGAGGTGCCGA
AAGCCTCCGCCTCCGCGCCGATCCTGAAAGACCTGCTCTTCACGGCGCACACGCTCAAGCTGGAGATCGAGTTTTCACCC
ATCTCCACGCGCGACTACCACAAATGGGTTGGCGAACAGGGCAAGCCGCGCTACCTGCTCTCGCTGCTCGGCAGAAAAAT
CACGTCGGAACATCTCGAACGGGTCACCACGCTGGTCGCCAGCCACGGCTTCAACATCGACACGATCAACCGCCTCTCGG
GCCGTCTGCCGCTCAAGGACGAGGGCGATTCCGGCAAAACAAAAGCCTGCATCGAGTTTTCGCTGAGGGGTGCACCCGCA
AACGAAGAACAGTTCAGAACTGAAATGCTGGCCATCACCGACAGCCTCGGCATCGACATCGCCTTCCAGGAGGACAACAT
CTTCCGGCGGACGCGACGGCTCGTGGTGTTCGACATGGACTCAACGCTGATTACGTCAGAGGTGATCGACGAACTGGCCA
AAGAGGCCGGATCAGGCGAGCTGGTGGCGGCGATCACCGAGCAGGCGATGCGCGGCGAACTCGACTTCACCGAGAGCCTG
AAAAAGCGCGTCGGCACGCTGGCGGGGCTGGAAGAATCGACGCTGCAGAAGGTGGCCGAGCGGCTGCAACTGACCGAAGG
CGCCGAGCACCTCTTCTACAACCTGCATCGCCTCGGCTTCAAAACCGCCATCCTCTCCGGCGGCTTCACCTACTTCGGGC
GCTACTTGCAGAAAAAGCTCAACATCGACTACGTCTTCGCCAACGAGCTTGAAATCGTGGACGGCAAGATGACCGGCAAC
GTCATCGGTCAGGTGGTCGATGGCAAGCGCAAGGCGGAGCTGCTCGAGCAGATCGCCGCCACGGAAAACATCCGCCTCGA
ACAGACCGTTGCGGTCGGCGATGGCGCCAACGACCTGCCAATGCTCGGCAAAGCCGGACTCGGCATCGCCTTCCGCGCCA
AGCCAATCGTACGCGAAACCGCAAAACAGGCGATCTCAACGCTCGGCCTCGACGCCATTCTCTATCTGATGGGATTCCGC
GACCGCGACGCGCTGGCGGTGTAG

Protein sequence :
MHELLLINISGPDKPGLTSKITEVLARYNVPVLDIGQSVIHNHLSLGMLIEVPKASASAPILKDLLFTAHTLKLEIEFSP
ISTRDYHKWVGEQGKPRYLLSLLGRKITSEHLERVTTLVASHGFNIDTINRLSGRLPLKDEGDSGKTKACIEFSLRGAPA
NEEQFRTEMLAITDSLGIDIAFQEDNIFRRTRRLVVFDMDSTLITSEVIDELAKEAGSGELVAAITEQAMRGELDFTESL
KKRVGTLAGLEESTLQKVAERLQLTEGAEHLFYNLHRLGFKTAILSGGFTYFGRYLQKKLNIDYVFANELEIVDGKMTGN
VIGQVVDGKRKAELLEQIAATENIRLEQTVAVGDGANDLPMLGKAGLGIAFRAKPIVRETAKQAISTLGLDAILYLMGFR
DRDALAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1477 YP_001800871.1 hypothetical protein Not tested Not named Protein 2e-59 41