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Name : nifJ (CT1628) Accession : NP_662511.1 Strain : Chlorobium tepidum TLS Genome accession: NC_002932 Putative virulence/resistance : Virulence Product : pyruvate flavodoxin/ferrodoxin oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 1534432 - 1537989 bp Length : 3558 bp Strand : + Note : identified by match to PFAM protein family HMM PF00037 DNA sequence : ATGACCCGGACATTCAAGACAATGGAGGGGAATGAAGCTCTTGCTCATGTCGCCTATCGCACTAATGAAGTCATCTCGAT ATACCCGATTACCCCGGCATCTCCGATGGGAGAGTACTCCGACGCATGGGCCGCTGTCGATGTAAAAAATATCTGGGGTA CCGTGCCACTCGTCAATGAGATGCAGAGCGAAGCCGGTGCCGCCGCCGCCGTTCACGGCGCGTTGCAGACCGGCGCGCTG ACGACCACCTTCACGGCCTCTCAGGGTCTCTTACTGATGATCCCGAACATGTACAAGATCGCCGGTGAACTGACCCCCTG CGTGATTCACGTGTCAGCCCGTTCGCTGGCCGCGCAGGCGCTCTCGATATTCTGCGACCACGGTGACGTGATGTCGGTCA GGGGCACCGGCTTCGCGCTGCTCGCTTCCTGTTCGGTACAGGAGGTAATGGACATGGCGCTGATTTCGCAGGCCGCAACG CTCGAATCGCGCGTGCCATTCCTGCACTTCTTCGACGGCTTCCGCACGTCGCACGAAATCTCGAAAATCGAGGTGCTCTC GGACGAACAGATTCGCTCGATGATCAACGACGAGCTGGTCTTCGCACACCGCATGCGCCGCATGTCGCCTGATGCACCGA TCATCCGCGGTACCTCGCAGAATCCGGACGTCTATTTCCAGGCACGCGAGAGCGTCAACAAATATTATGAGGCCTGCCCG TCAATCACCCAGAAGGCGATGGACCAGTTCGCCAAACTGACTGGGCGCAGCTATAAACTTTACCAGTACTACGGCGCTCC GGATGCCGACCGTATCATCATCATGATGGGGTCAGGTGCCGAGACCGCTCTCGAAACTGTCGAATACCTCAACAACCACG GCGAAAAGGTCGGTCTGGTCAAGGTACGCCTTTTCAGGCCATTCGACGTTGCAACCTTCATCGCATCGCTACCATCGAGC GTGAAGAGTATCGCGGTGCTCGACCGTGTCAAGGAACCAGGCAGCGCTGGCGAACCGCTCTATCTCGATGTAGTCAACGC CGTAGCCGAATCGTACCAGGAAGGCAAATGCGCTTCGATGCCAAGCGTTTTGGGTGGGCGCTATGGCCTGTCGTCGAAGG AGTTCACTCCGGCGATGGTCAAGGCGATCTTCGACAATATGAACGCGGAATCTCCAAAGAATCACTTCACCGTTGGCATC GACGATGACGTAACCAAGAAGAGCCTCGCCTACGACGAGACCTTCTCGATTGAGCCGGACTCGGTCTTCCGCGCCCTCTT CTACGGCCTCGGTTCAGACGGCACGGTCGGTGCAAACAAGAACTCGATCAAGATCATTGGCGAAAACACCGACAACTACG CGCAGGGCTTCTTCGTCTACGACTCCAAGAAAGCCGGTTCGATCACGACCTCGCACCTGCGGTTCGGCCCGGAGCAGATC CGCTCGACCTACCTCATCACCGAGGCGCAGTTCGTCGGCTGCCACCACTGGGTCTTTCTCGAAATGATCGACGTTGCCAA GAACCTCAAGCAGGGTGGTACGCTGCTCATCAACTCGGCCTATGCGCCGGATGTGGTGTGGAGCAAGCTCCCGCGTCCGG TGCAGCAGCACTTGATCGACAAGCAGGCGAAGCTCTACACCATCGATGCCTACAAGGTCGCCCACGAAAGCGGCATGGGT CAGCGCATCAACACTATCATGCAGGCCTGTTTCTTCGCCATTTCGGGCGTGCTGCCGCGTGAAGAGGCAATCGAAAAGAT CAAGGACGCGATCCGCCACACCTACGGCAAAAAGGGCGATGAGGTCGTTCAGCAGAACATCAAGGCAGTTGACAACACGC TTGCCAACCTGCATGAAGTGAAAATCGGCGCTGTGGCAGACAGCACCAAGGAGCTGCGCTCGCCCATCGTTGGCGACGCG CCAGAGTTCGTCTGTAACGTGCTGGCAAAGATTATTGCCGGCGAGGGCGACTCGATTCCGGTCAGCAAGCTGCCTGCCGA TGGAACCTATCCGCTCGGCACCACGAAGTTCGAGAAACGCAACCTCGCGCAGGAGATTCCGGTCTGGGCTCCGGAGCTGT GCATCGAGTGTGGCAAGTGCTCGATGGTCTGCCCGCACGCTGCCATCCGCATCAAGGTTTACGAGCCGAAGCACCTCGAA AACGCCCCGGCAACCTTCAAGAGCCTCGATGCGAAAGCAAAAAACTGGGAGGGCATGCGCTATACGGTTCAGATTGCACC GGAAGATTGTACCGGCTGCCAACTCTGCGTCAACGCCTGCCCCGCAAGAGACAAGCAGGTTGAAGGCCGCAAAGCGCTCA ACATGCACGAGCAGGCTCCGCTGCGCGAAACCGAATCTGCCTGCTGGAGCTTCTTCATCAATCTCCCGGAATTCGACCGC AACAAGATCAACCAGCGCCTCATCAAAGAGCAGCAGCTTCAGCAGCCACTCTTCGAGTTCTCGGGCGCATGCTCGGGCTG CGGCGAAACGCCATACGTCAAGCTGATGACTCAGCTCTTCGGTGATCGCCTCGTTATCGGCAACGCCACCGGCTGCTCGT CGATCTACGGCGGCAACCTGCCGACCACGCCGTATGCAGCCAACCCGCAGGGCCTTGGGCCAACGTGGTCGAACTCGCTT TTCGAGGACACGGCAGAGTTCGCGCTTGGTTTCCGGATATCGATCGACAAGCAGCAGCAATTTGCCAAAGAGCTGGTCAA AAAGCTCGCTGGTGACATCGGTGAAAACCTTGCCACCGCCATTCTCAACGCCACGCAGAACAGTGAACCGGAGATTTTCG AGCAGCGTGAGCGCGTGGCCGTGCTGAAGGATAAGCTCCAGCAGATGAAATCCGACGATGCCAAGAACCTGCTTGCTGTG GCTGACATGCTGGTCAAGAAGAGCGTGTGGGCTGTCGGCGGCGACGGCTGGGCCTACGATATCGGTTACGGGGGTCTCGA CCACGTCACCGCATCGGGCAAGAACGTCAACATGCTCGTGCTCGACACCGAGGTCTATTCCAATACCGGCGGTCAGGCCT CCAAGGCTACGCCGAAAGCCGCGATCGCCAAGTTTGCCGCTGCGGGGCGCATCGCTACCAAGAAAGACCTTGGTCTGATC TCGATGAGCTACGGCAATGCCTATGTGGCCAGTGTTGCACTTGGCGCACGTGACGAGCAGACACTCAGAGCTTTCATCGA AGCCGAGGCGTACGATGGCCCGTCGATTATCATCGCCTACTCGCACTGCATTGCACACGGCTTTGACTTGTCTATGGGTC TGGAGCACCAGAAAGCAGCGGTCGATTCCGGCCACTGGCTGCTGTATCGCTACAATCCCGACAGACTCAAGGAGGGACTG AATCCGCTGCAGCTCGACTCCAAAAAGCCGAAAATGCCGGTCGCGGAGTTCCTGAACATGGAGAACCGCTTCAGAATACT GAAGAAGACCCACCCCGATCTGGCCAAGAAGTACTTCGAGGCAATCCAGCACGAGGTCAATGCCCGCTGGGCACACTACG AACACCTCGCCAACCGTTCGATTGAAGGCGAAGCATAA Protein sequence : MTRTFKTMEGNEALAHVAYRTNEVISIYPITPASPMGEYSDAWAAVDVKNIWGTVPLVNEMQSEAGAAAAVHGALQTGAL TTTFTASQGLLLMIPNMYKIAGELTPCVIHVSARSLAAQALSIFCDHGDVMSVRGTGFALLASCSVQEVMDMALISQAAT LESRVPFLHFFDGFRTSHEISKIEVLSDEQIRSMINDELVFAHRMRRMSPDAPIIRGTSQNPDVYFQARESVNKYYEACP SITQKAMDQFAKLTGRSYKLYQYYGAPDADRIIIMMGSGAETALETVEYLNNHGEKVGLVKVRLFRPFDVATFIASLPSS VKSIAVLDRVKEPGSAGEPLYLDVVNAVAESYQEGKCASMPSVLGGRYGLSSKEFTPAMVKAIFDNMNAESPKNHFTVGI DDDVTKKSLAYDETFSIEPDSVFRALFYGLGSDGTVGANKNSIKIIGENTDNYAQGFFVYDSKKAGSITTSHLRFGPEQI RSTYLITEAQFVGCHHWVFLEMIDVAKNLKQGGTLLINSAYAPDVVWSKLPRPVQQHLIDKQAKLYTIDAYKVAHESGMG QRINTIMQACFFAISGVLPREEAIEKIKDAIRHTYGKKGDEVVQQNIKAVDNTLANLHEVKIGAVADSTKELRSPIVGDA PEFVCNVLAKIIAGEGDSIPVSKLPADGTYPLGTTKFEKRNLAQEIPVWAPELCIECGKCSMVCPHAAIRIKVYEPKHLE NAPATFKSLDAKAKNWEGMRYTVQIAPEDCTGCQLCVNACPARDKQVEGRKALNMHEQAPLRETESACWSFFINLPEFDR NKINQRLIKEQQLQQPLFEFSGACSGCGETPYVKLMTQLFGDRLVIGNATGCSSIYGGNLPTTPYAANPQGLGPTWSNSL FEDTAEFALGFRISIDKQQQFAKELVKKLAGDIGENLATAILNATQNSEPEIFEQRERVAVLKDKLQQMKSDDAKNLLAV ADMLVKKSVWAVGGDGWAYDIGYGGLDHVTASGKNVNMLVLDTEVYSNTGGQASKATPKAAIAKFAAAGRIATKKDLGLI SMSYGNAYVASVALGARDEQTLRAFIEAEAYDGPSIIIAYSHCIAHGFDLSMGLEHQKAAVDSGHWLLYRYNPDRLKEGL NPLQLDSKKPKMPVAEFLNMENRFRILKKTHPDLAKKYFEAIQHEVNARWAHYEHLANRSIEGEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 47 |
