Gene Information

Name : hemC (CT1427)
Accession : NP_662313.1
Strain : Chlorobium tepidum TLS
Genome accession: NC_002932
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1339848 - 1340786 bp
Length : 939 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
TTGAAAAAAGAGCTTATCATCGGCACTCGGTCCAGCCCTCTTGCCCTGTGGCAGGCTGAATTCACCAAAGCAGAACTGTC
CAGACACTTTCCTGAACTGAATATCACGCTCAAACTGGTCAAAACGACCGGTGATGTGCTGCTCGATTCCCCTCTTTCCA
AGATCGGAGACATGGGCCTGTTCACCAAAGACATTGAAAAGCACCTGCTTGCAAAAGAGATCGACCTGGCAGTGCATAGC
CTGAAGGACGTTCCAACCGGCACGCCTGAGGGTCTGGTCATCTCCTCGTTCACCAAGCGCGAAGATACCCGCGACGTTAT
TATCTCAAAATCCGGCAAGGGCCTGAAAGACCTTCCGCCGAATGCACGCATGGCCACCAGCTCCCTGCGCAGAATGTCGC
AGCTTCTGAGCATGAGGCCTGACTTGCAGATTCTCGACATCAGGGGCAACCTCAACACCCGCTTCAAGAAGTTCGACGAC
GGCGAATTCGACGCCATGATGCTGGCCTATGCTGGCGTGTATCGCCTTGAGTTCAGCGACCGCATCTCGGAAATCCTGCC
GCACGACGTGATGCTTCCGGCAGTCGGTCAGGGTGCACTCGGCATCGAGACCCGCACGGATGACGCTGAAACCATAGAGA
TCGTCCGCGTCATGAACGACAGCAACACTGAAATCTGCTGCCGTGCAGAGCGTGCGCTTCTCAGGCACCTCCAGGGTGGC
TGCCAGATTCCGATCGGCTGTTATGGCTCATATATCAGCGGCACCTTGAAGCTTCTAGCTTTTGTTGGCTCTGTAGACGG
TAAAACCGCCCTGCGCAATGAGCTGACCAAGCCGGTAAACACCCCGGAAGAGGCCGAGGCTGTCGGTATTGAGCTGGCTG
AAGTTCTGCTTTCGATGGGCGCGGAGAAAATTCTCGCCGACATCCGCAAAACCCGCTGA

Protein sequence :
MKKELIIGTRSSPLALWQAEFTKAELSRHFPELNITLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAKEIDLAVHS
LKDVPTGTPEGLVISSFTKREDTRDVIISKSGKGLKDLPPNARMATSSLRRMSQLLSMRPDLQILDIRGNLNTRFKKFDD
GEFDAMMLAYAGVYRLEFSDRISEILPHDVMLPAVGQGALGIETRTDDAETIEIVRVMNDSNTEICCRAERALLRHLQGG
CQIPIGCYGSYISGTLKLLAFVGSVDGKTALRNELTKPVNTPEEAEAVGIELAEVLLSMGAEKILADIRKTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-56 49
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-56 49