|
Name : BP0701 (BP0701) Accession : NP_879533.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 714308 - 715297 bp Length : 990 bp Strand : - Note : Similar to Escherichia coli GutQ protein GutQ or SrlQ or B2708 SW:GUTQ_ECOLI (P17115) (321 aa) fasta scores: E(): 2e-49, 48.438% id in 320 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4457 TR:Q9HVW0 (EMBL:AE004860) (326 aa) fasta scores: E(): DNA sequence : ATGAGCGCTCATCCCGACCCCACGCCCGAGGCCATTCTCGCCTCGGCACGCCGCACGCTGCAGACCGAGGCGCAAGCCAT TGCCGACCTCGCCGCCCGGCTCGACGACAGCTTCGTGCAGGTCGTCGGCATGCTGCTGGCCTGCCGCGGCCGTGTCGTGG TCAGCGGCATCGGCAAGACCGGGCACATTGCCCGCAAGCTGGCCGCCACCCTGGCCTCCACCGGCACGCCGGCCTTTTTC GTGCACGCCGCCGAAGCCATCCACGGCGACCTGGGGATGGTCACCCGCGACGATGTCCTGATCGCGATTTCCTATTCCGG CACCGGCCAGGAGCTGCTGACCATTCTGCCGGTGGTGCGCCGCATGGGCGCGGGACTGATCGCCATTACCGGCAACGCCG AATCCGAACTGGCCCGCCTGGCCGACGTGCACCTGGACGCCAGCGTGTCCCAGGAGGCCTGCCCGCTCAATCTGGCGCCC ACCGCCAGCACCACGGCGGCGCTGGCCCTGGGCGACGCCCTGGCGGTCGCCTGCCTGGAGGCGCGCGGCTTCGGCCGCGA GGATTTCGCGCGTTCCCACCCCGGCGGCGCCCTGGGCCGCCGCCTGCTCACCCACGTGCGCGACGTGATGCGGCACGGGC CCGCGCTGCCCATCGTCGCCGAAGACGCCCCCCTGCCCCGCGCGCTCGAGGAAATCTCGGCCAAGGGCATGGGCATGACG GCGGTCGTCGACGCACAGCGCAAGCCCGTGGGCATCTTCACCGACGGCGACCTGCGCCGCCTGATCGAGCGCGTCGGCGA CATCCGCAGCCTGACGGTAGCCGACGGCATGACCCGGGCTCCGCGTACCATCGGGCCTGACGCGCTGGCCGCCGAGGCCG CCCAGCAAATGGACGACCGCCGCCTCAACCAGATGCTGGTGGTGGACACCGCCGGCGTGCTGATCGGCGCCCTGCATACT CACGACTTGATGGCAGCCAAAGTAGTATGA Protein sequence : MSAHPDPTPEAILASARRTLQTEAQAIADLAARLDDSFVQVVGMLLACRGRVVVSGIGKTGHIARKLAATLASTGTPAFF VHAAEAIHGDLGMVTRDDVLIAISYSGTGQELLTILPVVRRMGAGLIAITGNAESELARLADVHLDASVSQEACPLNLAP TASTTAALALGDALAVACLEARGFGREDFARSHPGGALGRRLLTHVRDVMRHGPALPIVAEDAPLPRALEEISAKGMGMT AVVDAQRKPVGIFTDGDLRRLIERVGDIRSLTVADGMTRAPRTIGPDALAAEAAQQMDDRRLNQMLVVDTAGVLIGALHT HDLMAAKVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-54 | 46 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-54 | 46 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 9e-55 | 46 |
