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Name : lpdA (BP0618) Accession : NP_879460.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 623630 - 625039 bp Length : 1410 bp Strand : - Note : Similar to Escherichia coli dihydrolipoamide dehydrogenase LpdA or Lpd or B0116 SW:DLDH_ECOLI (P00391) (473 aa) fasta scores: E(): 4.1e-94, 55.579% id in 466 aa, and to Salmonella enterica subspenterica serovar Typhimurium. dihydrolipoamide dehydrogenase DNA sequence : ATGGCTTCGACGATGGAAACGGACTTGCTCGTGCTCGGCGGCGGACCCGGCGGCTATACCGCTGCGTTTCGCGCCGCCGA CCTGGGGCTTTCCGTGGTGCTGGTGGAGCAGCGTCCGACCCTGGGCGGCGTCTGCCTGAACGTGGGCTGCATTCCCTCCA AGGCGCTGCTGCATTGCGCCAAGGCGCTAGACGAGGCGCGCGCCATGAGCGAGCTGGGCATCGAGTTCAGCGAGCCGCGC ATACGCCTGGACAAGCTGCGCGCGCACAAGGAGGCGCTGGTGGCCAAGCTGTGCGGCGGCCTGGGCGGGCTGGCGCGCCA GCGCAAGGTGGAGGTGGTGACCGGCACGGGACGCTTCGACGGCCCGCACAGCCTGGCGGTATCCGATGGTTCCCGCGTGG CGTTCAAGCAGGCCGTCATCGCGGTCGGTTCGCGCCCGGTGCGCCTGCCGTTCCTGCCCGACGACCCGCGCATCATGGAT TCGACCGGCGCGCTGGAGCTCAAGGAAATTCCCCGGCGCCTGCTGGTGATCGGCGGCGGCGTCATCGGCATGGAGCTGGC CACGGTCTATGCGGCCCTGGGCGCGCGCGTGACGGTGGTCGAGCTGACCGACGGCCTGCTGCCGGGCTGCGACCGCGACC TGGTCAAGCCGCTGGCGCAGCGCGTGGCCAGCCGCTACGAGGCCGTCCTGCTGGGCACGCGCGTAAGCGCGGCCCAGGCG CGCGATGACGGCATCCATGTCAGCTTCGACGGCCCGCAGGCGCCCGGCCCGCAGGTGTACGATCAGGTGCTGGTGGCCGC GGGCCGCCGGCCCAATGGCGCGGCCATCGACGCCGAGCGCGCCGGCGCGCGGGTCGACGAGGGCGGCTTCATCCGCGTCG ACGCGCAGCAGCGCACCAATGTCGGGCACATCTACGCCATTGGCGACGTGGTGGGCGAGCCCATGCTGGCGCACAAGGCC GCCCATGAAGGCAAGGTGGCCGCCGAGACCGCGGCGGGCATGCGCGTGGCCAACGACGCGCGGGTGATTCCGGCGGTGGC CTACACCGATCCCGAGGTGGCCTGGGTAGGCCTGACCGAAACCGCGGCGCAGCGCGACGGCATTGCCTACGAGAAAGCCG CTTTTCCGTGGGCGGCCAGCGGCCGCGCGCTCAGCCTGGGACGCGGCGAGGGCCTGACCAAGATCCTCGTGGACCCGGCC ACGCACGCCTTGCTGGGCGTGGGCATGGTGGGGCCGCAGGCCGGCGACCTGATCGCCGAGGCCGCGCTGGCCATCGAGAT GGGCGCCGAACCGGGCGACATCGCGCTGACCATACACCCGCATCCGACCTTGTCCGAAACCCTGGCCTTCGCGGCCGAGG CGTACGAGGGAACGCTTACCGAGTTGTACCTGACCAGGAAAAAAAGTTAA Protein sequence : MASTMETDLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEARAMSELGIEFSEPR IRLDKLRAHKEALVAKLCGGLGGLARQRKVEVVTGTGRFDGPHSLAVSDGSRVAFKQAVIAVGSRPVRLPFLPDDPRIMD STGALELKEIPRRLLVIGGGVIGMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVASRYEAVLLGTRVSAAQA RDDGIHVSFDGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGARVDEGGFIRVDAQQRTNVGHIYAIGDVVGEPMLAHKA AHEGKVAAETAAGMRVANDARVIPAVAYTDPEVAWVGLTETAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPA THALLGVGMVGPQAGDLIAEAALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 6e-75 | 41 |
