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Name : hslU (BP3087) Accession : NP_881658.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding protein HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 3288521 - 3289855 bp Length : 1335 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCCGCAAATCACATGACCCCCGGCGAGATCGTCTCCGAACTCGACAAATTCATCATTGGCCAGAATCGCGCCAAGCG CGCGGTCGCGGTGGCGCTGCGCAACCGCTGGCGGCGCCAGCAGGTCGCCGAGCCGCTGCGCCATGAAATCCACCCCAAGA ACATCCTGATGATCGGGCCGACCGGGGTGGGCAAGACCGAAATCGCCCGCCGCCTGGCCAAGCTGGCCAATGCGCCGTTC ATCAAGATCGAAGCGACCAAGTTCACCGAGGTGGGCTATGTGGGCCGCGACGTCGACACCATCATCCGCGACCTGACCGA ATACTCGATCAAGCAGACACGCGAGCTGGAAATGCGCCGCGTGCGCAGCCATGCCGAAGACGCGGCCGAAGACCGCATCC TCGACGCGCTGGTGCCGCCGCCGCGCGGCGCCTCCGGCGAGCCCGAGCGCGGCGAGGACAACAGCGCGCGCCAGACTTTC CGCAAACGCCTGCGCGAGGGCAAGATCGACGACCTGGAGATCGAGATCGAGATCGCCCAGCCCATGCCGCAGATGGACGT CATGACGCCGCCCGGCATGGAAGAAATGGCCGAGCAGTTGCGCGGCATGTTCGCCGGCCTGGCGCGCGACAAGAAGAAAT CCAAGAAGATCAAGGTCAGGGAAGCCTTCAAGCTGATCGTCGAGGAAGAAGCCGCCAAGCGCGTCAACGAAGACGATCTG CGCGCGGCCGCGATCACCAACGTCGAACAGAACGGCATCGTGTTCCTGGACGAAATCGACAAGATCGCCGCACGCCAGGA GACAGGCGGCGCCGACGTGTCGCGCCAGGGCGTGCAGCGCGATCTGCTGCCGCTGGTCGAAGGCACCACGGTCAACACCC GCTACGGCATGGTGCGCACCGACCATATTCTGTTCATCGCCTCGGGCGCCTTCCATCTGGCCCGTCCCTCGGACCTCATC CCTGAATTGCAGGGACGCTTCCCCATCCGGGTCGAACTGGATTCGCTGAGCGCCGAAGACTTCGTCAGCATCCTGTCCGA GACGGACGCTTCGCTGATCAAGCAATACACCGCCCTGCTCGGCACCGAGGATGTGAAGCTGGAATTCACCGACGACGGCA TCCGCCGGCTGGCCGAACTGGCATTCTCGGTCAACGAGCGCACCGAGAACATTGGCGCACGACGCCTGTACACGGTGATG GAAAAACTGCTGGAAGAGCTGTCGTTCGATGCCAGCGCCAACTCGGGCGAAGTGATCACCATCGACGCCGCCTACGTCGA CCTGCAACTGGCCGAGACGGCCGGCAGCCAGGACCTGGCCCGCTACGTGCTGTAG Protein sequence : MSANHMTPGEIVSELDKFIIGQNRAKRAVAVALRNRWRRQQVAEPLRHEIHPKNILMIGPTGVGKTEIARRLAKLANAPF IKIEATKFTEVGYVGRDVDTIIRDLTEYSIKQTRELEMRRVRSHAEDAAEDRILDALVPPPRGASGEPERGEDNSARQTF RKRLREGKIDDLEIEIEIAQPMPQMDVMTPPGMEEMAEQLRGMFAGLARDKKKSKKIKVREAFKLIVEEEAAKRVNEDDL RAAAITNVEQNGIVFLDEIDKIAARQETGGADVSRQGVQRDLLPLVEGTTVNTRYGMVRTDHILFIASGAFHLARPSDLI PELQGRFPIRVELDSLSAEDFVSILSETDASLIKQYTALLGTEDVKLEFTDDGIRRLAELAFSVNERTENIGARRLYTVM EKLLEELSFDASANSGEVITIDAAYVDLQLAETAGSQDLARYVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-94 | 45 |
