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Name : glcE (BP2904) Accession : NP_881486.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : glycolate oxidase FAD binding subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 3081508 - 3082617 bp Length : 1110 bp Strand : - Note : Similar to Pseudomonas aeruginosa glycolate oxidase subunit GlcE or Pa5354 TR:Q9HTK4 (EMBL:AE004947) (359 aa) fasta scores: E(): 2.9e-36, 51.51% id in 363 aa, and to Escherichia coli glycolate oxidase subunit GlcE or Gox or b2977.1 SW:GLCE_ECOLI (P52073) DNA sequence : ATGGATTTCGTCCTGTCGGAGTTGTGCGATCAGGTGATGACGGCGCGCGCCGGTCACAAGCCTCTGTTCATCGTCGGTGG CGGCACCAAAGGGTTTTACGGCAATCATCGTGCCGTGACGCCGCAGGATGGCCACTGCCTGCTGGATATGACCCCTTATC GCGGCATCGTCAGCTACCAGCCTTCGGAACTGGTGGTGACGGCGCGCGCGGGTACGCCGCTGGCCGAGCTCGAGGCGGCG CTGGCCGAGCACGGCCAGATGCTGGCTTTCGAGCCGCCGCATTTCGGGCCTGGCGCGACGCTGGGCGGTTGCGTGGCCGC CGGCCTGTCCGGGCCGCGCCGCATGGCCGCCGGCGCCGTGCGCGATTTCGTGCTGGGCGCGCGCCTGCTGGATTCGCAGG GCCATATCCTGGCGTTTGGCGGGGAAGTCATGAAGAACGTGGCCGGCTATGACGTCTCGCGGCTGCAGGCCGGCGCGCAA GGGATTTTCGGCGCCTTGCTGGAAGTCTCGCTGAAAGTCGTGCCCCGGCCGGCCGTGGTGGAGTCGTTGCGGTTGCCCGC CACGCAGGACGAGGCTCTGCGCTGGTTCGGACAATGGCGCGGGCGGCCGCTGCCGATCTCGGCCAGTTGCTGGACGGCCG ATGGCGCGGCCGACGGCGGCGGCGCGGTGGTGCTGCGGCTGGCCGGCGCGCCGCCGGCGGTGCAGGCGGCCCGCGAAGTC CTGGGCGGAGAACTGCTGGATGCGGCGCAGGCCCACGACTGGTGGGAGTCCTTGCGCGAGCAGAGCCATGCCTTCTTCGA TCGCGGCATGCCCCTGTGGCGGCTGGCGGTGCCGCCCACCGCGCCCGCGCTGGCGCTGGGCCCCACCCTGATCGAATGGG GCGGCGGACAGCGCTGGCTCAGCGGCCACTACGATGCGCAGGCGGTGCGCGCGGCGGCCGCCCAGGCGGGTGGGCATGCC ACGCTGTTTCGTGCCGCCGGCCGCGCGGCGCCGGCCGACGGCGTGTTCCATCCCCTTTCGGACGGTGTGGCGGCCATCAC GCGCCGCCTCAAGCAGGAGCTGGATCCGGCCGGCCTGTTCAACCCCGGGCGTCTGGTGCCGGAACTCTAG Protein sequence : MDFVLSELCDQVMTARAGHKPLFIVGGGTKGFYGNHRAVTPQDGHCLLDMTPYRGIVSYQPSELVVTARAGTPLAELEAA LAEHGQMLAFEPPHFGPGATLGGCVAAGLSGPRRMAAGAVRDFVLGARLLDSQGHILAFGGEVMKNVAGYDVSRLQAGAQ GIFGALLEVSLKVVPRPAVVESLRLPATQDEALRWFGQWRGRPLPISASCWTADGAADGGGAVVLRLAGAPPAVQAAREV LGGELLDAAQAHDWWESLREQSHAFFDRGMPLWRLAVPPTAPALALGPTLIEWGGGQRWLSGHYDAQAVRAAAAQAGGHA TLFRAAGRAAPADGVFHPLSDGVAAITRRLKQELDPAGLFNPGRLVPEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcE | CAE85244.1 | GlcE protein | Not tested | PAI V 536 | Protein | 4e-49 | 47 |
