Name : dnaB (BP2791) Accession : NP_881391.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2966359 - 2967732 bp Length : 1374 bp Strand : - Note : unwinds double stranded DNA DNA sequence : ATGAATACCCCTGCCGATCCCCAGCTCGAATACCTGCGCGTGCCGCCGCACTCGATCGAGGCCGAGCAGTCGGTGCTGGG CGGCCTGTTGCTGGACAACGCCGCCTGGGACCGCATCGCCGACGTCCTGGTCGAGGAAGACTTCTATCGCCACGACCACC GCCTCATCTGGCACCATATCGCCCGGCTGATCGGCCTGGCCCGCCCGGCCGACGTCATCACCGTCAATGAATCGCTGGCC AGCGCCGGCAAGTCCGAGGAGGTGGGCGGGCTGGCCTATCTCAACGCGCTGGCGCACAACACCCCGTCGGCGGCCAACAT CCGCCGCTATGCCGAGATCGTGCGCGAGCGCGCCATGCTGCGCAAGCTGGTGTCGATCGCCGACGAGATCTCGGCGGCCG CGCTCAATCCGCAAGGCAAGGAGGCCCGCCAGTTGCTGGACGAGGCCGAATCCAAGGTGTTCAAGATCGCCCAGGAAGGC GAACGCGGCTCGGCGGGTTTCCAGGAAATCCAGCCGCTGCTGACCCAGGTGGTAGAACGGATCGACGAGCTGTATCACCG CGAAAGCGAGTCCGATGTCACCGGCGTGCCGACCGGCTTCGCTGATCTGGACAAGATGACTTCCGGGCTGCAGGCCGGCG ACCTGGTCATCGTGGCCGGCCGTCCGTCCATGGGCAAGACCTCGTTCTCGATGAACATCGGCGAGCACGTCGCCATCGAG CAGGGGCTGCCGGTGGCGGTCTTCTCGATGGAAATGGGCGCGGTGCAGCTGGCCATGCGTATGCTGGGCTCGGTGGGCAT GCTCGACCAGCATCGCATGCGTACCGGCAAGCTGGTCGCCGACGATTGGCCGCGCGTCACCCACGCGGTGCAACTGATGC AGGACGCGCAGGTCTACATCGACGAAACGCCCGCGCTCAGCTCGATGGAAGTGCGCGCCCGCGCGCGGCGCCTGGCGCGC CAGTGCGGGCAGCTGGGCCTGATCATCATCGACTACCTGCAGCTGATGTCGGCCAACAGCGCGGGCGAAAACCGCGCGAC CGAAATCTCGGAAATCAGCCGCTCGCTCAAGGGCCTGGCCAAGGAGCTCAACTGTCCGCTGATCGCGCTGTCGCAGCTCA ACCGCAGCCTGGAGCAGCGCCCCAACAAGCGGCCGGTAATGAGCGACCTGCGCGAATCCGGCGCCATCGAGCAGGACGCC GACGTGATCCTGTTCATCTATCGCGACGAGGTCTACAACCCGGACTCGCCCGACAAGGGCTCGGCCGAGATCATCATCGG CAAGCAGCGTAACGGTCCGATCGGCACCGTGCGCCTGACCTTCCAGGGGTCGAGCACGCGCTTTCTCAATTTCGCGCCCG GCACCCAGTACTGA Protein sequence : MNTPADPQLEYLRVPPHSIEAEQSVLGGLLLDNAAWDRIADVLVEEDFYRHDHRLIWHHIARLIGLARPADVITVNESLA SAGKSEEVGGLAYLNALAHNTPSAANIRRYAEIVRERAMLRKLVSIADEISAAALNPQGKEARQLLDEAESKVFKIAQEG ERGSAGFQEIQPLLTQVVERIDELYHRESESDVTGVPTGFADLDKMTSGLQAGDLVIVAGRPSMGKTSFSMNIGEHVAIE QGLPVAVFSMEMGAVQLAMRMLGSVGMLDQHRMRTGKLVADDWPRVTHAVQLMQDAQVYIDETPALSSMEVRARARRLAR QCGQLGLIIIDYLQLMSANSAGENRATEISEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA DVILFIYRDEVYNPDSPDKGSAEIIIGKQRNGPIGTVRLTFQGSSTRFLNFAPGTQY |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-105 | 54 |
PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-89 | 48 |
dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-91 | 48 |
api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-91 | 48 |
dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-86 | 47 |
dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-89 | 46 |
t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-82 | 45 |
STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-82 | 45 |
dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-73 | 42 |