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Name : BP1986 (BP1986) Accession : NP_880660.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2096958 - 2098634 bp Length : 1677 bp Strand : + Note : Similar to Agrobacterium tumefaciens MoaD TR:O50270 (EMBL:AF242881) (588 aa) fasta scores: E(): 2.2e-81, 48.35% id in 548 aa, and to Rhizobium meliloti peptide transport ATP-binding ABC transporter protein smc04288 TR:CAC46528 (EMBL:AL591789) (593 aa) fas DNA sequence : ATGACCGCGTCCGCGCCTTTGCTGCGCATCGAAGGGCTGGATGTCGACGTGGCCGGCGAGTCCGGCGTCACGCATGCCGT CAAGCGGCTGCAGCTGGCCGTGGCGCAGGGCGAGACCTTCGCCCTGGTCGGCGAGTCGGGCAGCGGCAAGAGCATGACCG CGCTGGCCCTGCTGCGGCTGCTGCCCGATGCCGGGCGCATCGTCGGCGGCCAGATCGAACTGGGCGGCACCGACCTCAAC GACCTGTCCGAGCGCGCCATGCGCGGCGTGCGCGGCGGCCGCATCGGCATCATCTTCCAGGAGCCCGCCACCAGCCTGAA TCCCGTGATGCGGGTGGGCGACCAGATCGTCGAGACCCTGGCCGCCCATACGCCCTTGCGCGGCGCGGCGGCGCGCGAGC GGGCCATCGACTGGCTGCGGCGCGTCGGCATCCCCGAGCCCGAGCGGCGCATCGACGACTATCCCTTCCAGTTCTCGGGC GGCCAGAAGCAGCGCCTGATGATCGCCATCGCGCTGGCGGCCGAGCCCAAGCTGCTGATCGCCGACGAGCCCACCACGGC GCTCGACGTCACCGTGCAGGCCCAGGTGCTGGAGCTGCTGGCCGGCATCCAGCGCGAGATGGGCATGGCGGTGCTGCTGA TCACGCACGACCTGGCGGTGGTGCGCAACGTGGCGCATCACGTGGCCCTGATGCGCGGCGGCGAGATCGTCGAAAGCGCC GATGCGCGCACGTTCTTCGAGCGGCCGCGCCATCCCTATGCGCGCGAACTGTTCGAGGCCATTCCCACCTTCGCCAAGCG CGGCCGGCCGCTCTCGGCCCAGGGCCGCGCGGCGGACCAGGGCAAGGCCGCGCCCGAGGCCGGCGCGGTGGTCCTGGATG TGCAGGACCTGCTGGTGCACTATCCGGTGCGCAAGGGCGTGCTGCGCCGCGTGGCCGCGTGGGTCGAGGCCGTCAACGGC GTCACCTTCACCCTGCGCGCCGGCGAGACCCTGGCGCTGCTGGGCGAATCGGGTTGCGGCAAGACCACCACCGGCAAGGC CTTGCTGCGCCTGGTCGAAGGCGCGCGCGTGCAGGGGCGCGCCATGCTCGATGGGCATGATCTGCTGGGCGCGTCGCGGC GCGAGCTGCGGCGGCTGCGGCAGGACATCCAGATCGTGTTCCAGGATCCCTTCGCGTCGCTCGACCCGCGCATGCGGGTC GGCGATATCCTCGAAGAGGGCATTGCCTCGCTGCGCCCCGAACTGGCCGCTTCGGCGCGCAGGGCGCGGGCCGTGGGCCT GCTGGAGCGGGTGGGGCTGCCGGCCGACACGCCCACGCGCTATCCGCACGAATTCTCGGGCGGCCAGCGCCAGCGCATCG CCATCGCGCGGGCGCTGGCGGTCGAACCGAAGGTGCTGATCTGCGACGAACCCACTTCGGCGCTGGACGTGTCGGTGCAG GCGCAGATCCTCGATCTGCTGCGCGACCTCCAGGCCGAGCTGGGCATCGCCTACCTGTTCATCACGCACAACTTCGGCGT GGTCGAATACCTGGCCGACCGCATCGCGGTCATGCACGGCGGACGCATCGTCGAGATGGGGCCCGCCGATACCGTGCTGC ACGCGCCGCGCCACGAGATGACGCAGCGCCTGCTGGCCGCCGTGCCGCGGCTGCGGTTCGGGGCGGAGAACGAGTAG Protein sequence : MTASAPLLRIEGLDVDVAGESGVTHAVKRLQLAVAQGETFALVGESGSGKSMTALALLRLLPDAGRIVGGQIELGGTDLN DLSERAMRGVRGGRIGIIFQEPATSLNPVMRVGDQIVETLAAHTPLRGAAARERAIDWLRRVGIPEPERRIDDYPFQFSG GQKQRLMIAIALAAEPKLLIADEPTTALDVTVQAQVLELLAGIQREMGMAVLLITHDLAVVRNVAHHVALMRGGEIVESA DARTFFERPRHPYARELFEAIPTFAKRGRPLSAQGRAADQGKAAPEAGAVVLDVQDLLVHYPVRKGVLRRVAAWVEAVNG VTFTLRAGETLALLGESGCGKTTTGKALLRLVEGARVQGRAMLDGHDLLGASRRELRRLRQDIQIVFQDPFASLDPRMRV GDILEEGIASLRPELAASARRARAVGLLERVGLPADTPTRYPHEFSGGQRQRIAIARALAVEPKVLICDEPTSALDVSVQ AQILDLLRDLQAELGIAYLFITHNFGVVEYLADRIAVMHGGRIVEMGPADTVLHAPRHEMTQRLLAAVPRLRFGAENE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-89 | 43 |
