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Name : pcaI (BP1788) Accession : NP_880497.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : 3-oxoadipate CoA-transferase subunit A Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1788 EC number : 2.8.3.6 Position : 1878765 - 1879433 bp Length : 669 bp Strand : + Note : Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit A PcaI SW:PCAI_PSEPU (Q01103) (231 aa) fasta scores: E(): 1.9e-43, 52.51% id in 219 aa, and to Ralstonia solanacearum probable 3-oxoadipate CoA-transferase subunit A protein PcaI TR:CAD159 DNA sequence : ATGCTCAACAAGACCTGCGAGTCCGCCGACGAGGCGGTCAGTGTCGTGGAAAGTGGCGCAACAATCCTGATCAGCGGCTT CGGGGACATCGGCTTGCCGTTCGAACTGTTGCATGCGCTGGCGCGCACCTCGGTCAAGGATCTCACCATCGTCTCCAACA ATGCCGGGACGGGCGAACTGGGGTTGTCGCGGCTGTTCAGGAACCGCCAGGTTTCGCGCCTGATCGCTTCTTTTCCGTCG CAGCCGGATTCGCACCATTATTTCGCCGCGTACCAGGAAGGACTGGTGGACCTGGAGCTGGTGCCGCAGGGCACGCTGGC CGAACGCATCCGCGCGGCGGGCGCCGGCCTGGCCGGGTTCTTCACGCCCACCGGCTACGGCACCGAGCTGGCGCAGGGCA AGGAGTGCCGGATGTTCAAGGGCAAGGGATATGTCTTCGAGGAAGCCCTGCCAGGCGATTTCGCCTTCATCAAGGCGCAC GTCGCCGATGCCTACGGCAACTTCCGGTATCGCCGCGCCAGCCGGACTTTCAATCCCATCATGGCCATGGCGGCGCGCAC GACCATCGCCGAGGCCAAGCAGATGGTTCCCGTCGGCAGTATCGATCCCGACGACGTCCATACGCCCGGCGTATTCGTCG ACCGGATAGTGGAGGTGCGAGATGAGTAA Protein sequence : MLNKTCESADEAVSVVESGATILISGFGDIGLPFELLHALARTSVKDLTIVSNNAGTGELGLSRLFRNRQVSRLIASFPS QPDSHHYFAAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGYVFEEALPGDFAFIKAH VADAYGNFRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDVHTPGVFVDRIVEVRDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 9e-33 | 44 |
