Gene Information

Name : lspA (BP1752)
Accession : NP_880464.1
Strain : Bordetella pertussis Tohama I
Genome accession: NC_002929
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 1837100 - 1837606 bp
Length : 507 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGACGCAGGCCCGCGCCGCCGCGCCGCGACTGGCCCCCTGGCTGGCCGCGGCCGCCCTCATCATCGTGCTGGACCAGGC
GACCAAGCTGTACTTCGACGGCGCCTTCCAGTACGGCGAACGCCTCAACGTACTGCCGTTCTTCGACTTCACGCTGCTGT
ACAACCGGGGCGCGGTATTCAGCTTTCTCGCTTCCGAGGAAGGCTGGCAACGCTGGTTCTTCACCGCGCTGGGCGTGGGC
GCCTCGATCGTCATCGTCTGGCTGCTGCGCCGCACCGCCGGCCAGCCGCGCTTCAGCCTGGCCCTGACGCTGATCATGGG
CGGCGCGCTGGGCAATGTGATCGACCGCGTGGCCTACGGCCATGTCGTGGACTTCCTGCTGTTCTACTGGCGCGACTGGC
ACTATCCCGCATTCAACCTGGCCGACGTGGCCATCACCTGCGGCGCCGTGCTGCTGGTCGTCGACGAGCTGCTGCGGGCG
CGCAAGCGGCCGACCGCGCAGGACTGA

Protein sequence :
MTQARAAAPRLAPWLAAAALIIVLDQATKLYFDGAFQYGERLNVLPFFDFTLLYNRGAVFSFLASEEGWQRWFFTALGVG
ASIVIVWLLRRTAGQPRFSLALTLIMGGALGNVIDRVAYGHVVDFLLFYWRDWHYPAFNLADVAITCGAVLLVVDELLRA
RKRPTAQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-18 49
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 8e-18 49
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-18 49
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 9e-21 46
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-20 46
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-20 46
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 9e-21 46
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 9e-21 46
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 2e-22 43