Gene Information

Name : phoB (BP0160)
Accession : NP_879053.1
Strain : Bordetella pertussis Tohama I
Genome accession: NC_002929
Putative virulence/resistance : Resistance
Product : phosphate regulon transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 159087 - 159785 bp
Length : 699 bp
Strand : -
Note : Similar to Escherichia coli phosphate regulon transcriptional regulatory protein PhoB or B0399 or Z0497 or ECS0449 SW:PHOB_ECOLI (P08402) (229 aa) fasta scores: E(): 2.6e-52, 59.211% id in 228 aa, and to Vibrio cholerae DNA-binding response regulator PhoB

DNA sequence : 
ATGTCCAGCACCATTCTTGTCGTTGAAGACGAACCCGCCATCCAGGAACTGATCGCCGTGAACCTTTCGTTCGCGGGCCA
CAAGGTCCTGCGCGCGTTCGATGCCGAACAGGCCCAGACCCTGATCCGCGCCGAGCTGCCCGACCTCATCCTGCTCGACT
GGATGCTGCCGGGGGCCTCCGGCCTGTCGCTGGCCCGCAAGCTGCGCGACGAAGAGCGCACCCGCGCCGTCCCGGTCATC
ATGCTGACGGCCAAGGGCGCCGAACAGGACAAGGTCGACGGCCTGGAGGCGGGCGCCGACGACTACATCACCAAGCCCTT
CTCGCCCAAGGAGCTGATGGCGCGCATCAAGGCCGTGCTGCGCCGCCGCGCCCCGCAGCTGACCGACGACATCATCGACG
TCGCCGGGCTGAAGCTGGACCCGGTCACCCACCGCCTGTCGGGCCACAGCCAGTCGCTGTCCATCGGGCCCACCGAGTTC
CGCCTGCTGCACTTCTTCATGACCCACCCGGAGCGGGTGTTTTCCCGCTCGCAGCTGCTCGACCAGGTGTGGGGCGACCA
CGTCTTCGTGGAAGAGCGCACGGTGGACGTACATATCCGCCGCCTGCGCAAGGCGCTGGAACCCAGCGGCCATGACGCGC
ACGTCGAGACGGTGCGCGGCAGCGGCTACCGGTTTACAGCACAGGTGCCGGCGCGCTAA

Protein sequence : 
MSSTILVVEDEPAIQELIAVNLSFAGHKVLRAFDAEQAQTLIRAELPDLILLDWMLPGASGLSLARKLRDEERTRAVPVI
MLTAKGAEQDKVDGLEAGADDYITKPFSPKELMARIKAVLRRRAPQLTDDIIDVAGLKLDPVTHRLSGHSQSLSIGPTEF
RLLHFFMTHPERVFSRSQLLDQVWGDHVFVEERTVDVHIRRLRKALEPSGHDAHVETVRGSGYRFTAQVPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 1e-33 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 1e-33 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 1e-33 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein HE999704.1.gene2815. Protein 4e-38 44
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_002952.2859905.p0 Protein 3e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_007793.3914279.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_007622.3794472.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_002745.1124361.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_009782.5559369.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_002951.3237708.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_003923.1003749.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_002758.1121668.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_009641.5332272.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_013450.8614421.p0 Protein 2e-38 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein AE000516.2.gene3505. Protein 9e-33 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein CP000647.1.gene2531. Protein 5e-35 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein CP001918.1.gene3444. Protein 8e-36 42
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_012469.1.7685629. Protein 3e-37 41
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein CP000034.1.gene2186. Protein 3e-35 41
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein CP001138.1.gene2239. Protein 3e-35 41
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein NC_002695.1.916589.p Protein 2e-35 41
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein BAC0039 Protein 3e-35 41
phoB NP_879053.1 phosphate regulon transcriptional regulatory protein BAC0596 Protein 3e-35 41