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Name : wbpO (BP1629) Accession : NP_880357.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1713025 - 1714314 bp Length : 1290 bp Strand : + Note : Similar to Pseudomonas aeruginosa WbpO TR:Q9RHD7 (EMBL:AF035937) (422 aa) fasta scores: E(): 3.1e-132, 80.23% id in 420 aa, and to Plesiomonas shigelloides orf1p WbgT TR:Q9S0Y5 (EMBL:AB025970) (437 aa) fasta scores: E(): 2.2e-120, 70.69% id in 430 aa. Alm DNA sequence : ATGCCGAAGAAGTTTTCCAATCCTGCAGATGTTCATCTCGCCGTCGTTGGCCTGGGGTATGTCGGGCTGCCGCTGGCCGT GGAGTTCGGCAAGAAACGCCCGGTGATCGGCTTCGATATCAACGAGCGCCGCATCGCCGCGCTCAAGGCCGGCCACGATC ACACCCTGGAAGTCGAGGACGACGAACTGGCCCGGGCCGCGCAGCTCAGCTACACCGCCGAGCGCGAGGAACTGGGCAAG GCCAATGTGTTCATCGTCACCGTGCCCACGCCGATCGACGAGTACAAGCAGCCCGACCTCACGCCGCTGGTCAAGGCCAG CGAGACCATCGGCGCGGTGCTCAAGCGCGGCGACATCGTGATCTACGAATCGACCGTGTACCCGGGCGCCACCGAGGAAG ACTGCGTGCCGGTGCTCGAGCGCGTGTCGGGCCTGAAGTTCAACCAGGACTTCTACGCCGGCTACAGCCCCGAGCGCATC AACCCGGGCGACAAGGCGCACCGCGTCAACACCATCAAGAAGGTGACCTCGGGCTCGACGCCGGAAGTCGCCGAGCTGGT CGACCAGCTGTACAACGAGATCATCACGGCCGGCACCCACAAGGCCTCGAGCATCCGCGTGGCCGAGGCCGCCAAGGTGA TCGAGAACACGCAGCGCGACGTCAACATCGCGCTGATCAACGAGCTGGCGCTGATCTTCAACAAGATGGGCATCGACACC GAGGCCGTGCTGCAGGCCGCCGGCACCAAGTGGAACTTCCTGCCGTTCCGTCCGGGCCTGGTGGGCGGGCACTGCATCGG CGTGGATCCGTACTACCTGACGCACAAGGCGCAGGCCATCGGCTACCACCCTGAGATCATCCTGGCGGGCCGCCGCCTGA ACGACTCGATGGGCGGCTACGTGGTCTCGCAGCTGGTCAAGGCCATGGCCAAGCGCCGCATCCACGTCGAGGGCGCGCGC GTGCTGCTGATGGGCCTGACGTTCAAGGAAAACTGCCCCGACCTGCGCAACACGCGCGTGGTGGACATCGTGCGCGAGCT GGGCGAGTACCACGTCGACGTGGACGTGTACGACCCGTGGGTGGACCCGGCCGAGGCCGAGCACGAGTACGGCATCACGC CGGTCGCCAAGCCGGCCGCCGGGGCGTACGACGCGATCATCCTGGCGGTGTCGCACCACCAGTTCGTCGAGATGGGCGCC GAGGCGATCCGCAAGTTCGGCAAGGCCGAGCACATCCTGTACGACCTGAAGTACGTGCTGGCCCCCGAGCAGGCCGACCT GAGGCTGTAA Protein sequence : MPKKFSNPADVHLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSYTAEREELGK ANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGATEEDCVPVLERVSGLKFNQDFYAGYSPERI NPGDKAHRVNTIKKVTSGSTPEVAELVDQLYNEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDT EAVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAKRRIHVEGAR VLLMGLTFKENCPDLRNTRVVDIVRELGEYHVDVDVYDPWVDPAEAEHEYGITPVAKPAAGAYDAIILAVSHHQFVEMGA EAIRKFGKAEHILYDLKYVLAPEQADLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-143 | 69 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-143 | 69 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-112 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpO | NP_880357.1 | capsular polysaccharide biosynthesis protein | VFG0431 | Protein | 7e-144 | 69 |
