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Name : glnA (BP1596) Accession : NP_880329.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 1674925 - 1676337 bp Length : 1413 bp Strand : + Note : Similar to Escherichia coli glutamine synthetase GlnA or B3870 or Z5406 or Ecs4792 SW:GLNA_ECOLI (P06711) (468 aa) fasta scores: E(): 1.9e-129, 64.95% id in 468 aa, and to Herbaspirillum seropedicae glutamine synthetase GlnA TR:O86055 (EMBL:AF082873) (471 DNA sequence : ATGGCAAGCCCCAAAGACGTTCTCAAGCAGATCGCCGACAACGAAGTCAAGTTCGTGGATTTCCGCTTCACCGATACGCT CGGGCGCGAGCACCACGTTTCCGTTCCCACCTCGGCTGTCGACGAGGACAAGCTGGAGAGCGGGCAGGCGTTCGACGGGT CGTCGATCCCGGGCTGGAAGGGCATCGAAGCCTCCGACATGCTGTTGATTCCCGACCTGGACACGGCCAACCTGGACCCG TTCCGCGAAGAGCCGACCTTGATCCTGAGCTGCGACGTGGTCGAGCCGTCGGACCTGAAGGGCTATGACCGCGACCCGCG TTCGCTGGCCAAGCGCGCCGAAGCCTACCTGAAGTCCTCCGGCCTGGGCGATACCGCCTACTTCGGTCCGGAACCCGAGT TCTTCGTGTTCGACGGCGTGACCTGGAACACCGACATGTCGGGCACCTTCGTCAAGATCAAGTCGGAAGAGGCGCCGTGG TCCAGCGGCCTGGAATTCGAAGGCGGCAACATGGGCCATCGTCCGGGCCCCAAGGGCGGCTACTTCCCCGTGCCGCCGGT CGATTCGTTCCAGGACATGCGTTCCGAAATGTGCCTGCTGCTCGAGCAGATGGGCGTGCCGGTCGAAGTGCACCACCATG AAGTGGCCGCGCCCGGCCAGCTGGAAATCGGCACCAAGTTCAGCACGCTGGTGCAACGCGCGGACTGGAACCAGGTCATG AAGTACGTGATCCACAACGTGGCGCACGTATACGGCAAGACCGCGACGTTCATGCCCAAGCCCATCGTCGGCGACAACGG CTCGGGCATGCACGTGCACCAATCGATCTGGAAGGACGGCCAGAACCTGTTCGCGGGCAACGGCTACGCCGGCCTGTCGG AGTTCGCGCTGTACTACATCGGCGGCATCATCAAGCACGCCCGCGCGCTCAATGCCATCACCAATCCGGGCACCAACTCG TACAAGCGCCTGGTGCCGCACTTCGAGGCGCCGGTGAAGCTGGCCTATTCGGCCCGCAACCGCTCGGCCTCGATCCGCAT CCCGTACGTCGGCAACCCCAAGGCGCGCCGCATCGAGACGCGCTTCCCGGATCCGCTGGCCAACCCGTACCTGGCGTTCT CGGCCCTGATGATGGCCGGCCTGGACGGCGTGCAGAACAAGATCCACCCGGGCGACCCGGCCGACAAGAACCTGTACGAC CTGCCGCCGGAAGAAGACGCCAAGATCCCGACCGTCTGCGCGTCGCTGGAAGAGGCCCTGGCCGCGCTGGACAAGGATCG CGAGTTCCTGACCCGTGGCGGCGTGTTCAGCAACGACATGCTCGACGCCTACATCGAACTGAAGATGGGCGAAGTCACGC GTCTGCGCATGACCACGCATCCGGTCGAATTCGACATGTACTACAGCCTGTAA Protein sequence : MASPKDVLKQIADNEVKFVDFRFTDTLGREHHVSVPTSAVDEDKLESGQAFDGSSIPGWKGIEASDMLLIPDLDTANLDP FREEPTLILSCDVVEPSDLKGYDRDPRSLAKRAEAYLKSSGLGDTAYFGPEPEFFVFDGVTWNTDMSGTFVKIKSEEAPW SSGLEFEGGNMGHRPGPKGGYFPVPPVDSFQDMRSEMCLLLEQMGVPVEVHHHEVAAPGQLEIGTKFSTLVQRADWNQVM KYVIHNVAHVYGKTATFMPKPIVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSEFALYYIGGIIKHARALNAITNPGTNS YKRLVPHFEAPVKLAYSARNRSASIRIPYVGNPKARRIETRFPDPLANPYLAFSALMMAGLDGVQNKIHPGDPADKNLYD LPPEEDAKIPTVCASLEEALAALDKDREFLTRGGVFSNDMLDAYIELKMGEVTRLRMTTHPVEFDMYYSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 6e-98 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | NP_880329.1 | glutamine synthetase | VFG1399 | Protein | 5e-101 | 50 |
