|
Name : BP1320 (BP1320) Accession : NP_880081.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG0325 EC number : - Position : 1384934 - 1385749 bp Length : 816 bp Strand : + Note : Similar to Xylella fastidiosa hypothetical protein Xf1717 TR:Q9PCR1 (EMBL:AE003995) (266 aa) fasta scores: E(): 1e-62, 67.82% id in 258 aa, and to Bacillus halodurans Bh2550 protein TR:Q9K9U5 (EMBL:AP001515) (228 aa) fasta scores: E(): 1.3e-27, 43.04% id DNA sequence : ATGCACGCCGATACTGCCCAGGATGCGCCCGACGCGGCGGCGCGTTACCCCCGCGCCGACAGCGTGGCCGATTTCGAGCA CAACCTGGCGGCGGTGCGGGCCCGCATGGCGGCGGCCTGCCAGCGGGCCGGGCGCGACCCGGCCGGCGTGCGGCTGTTGC CGGTCAGCAAGACGGTGGACGAGGCCCGCATCCGCATGTCGTATGCCGCCGGCTGCCGCGAGCTGGGCGAGAACAAGGTC CAGGAGGCCTACCGGAAATGGGAGGCCATGGCCGACCTGGCCGACTTGCGCTGGTCGGTGATCGGCCATCTGCAGACCAA CAAGGCCAAGCTGGTGGCGCGCTTCGCGGCCGAGTTCCAGGCGCTCGACAGCGTGCGCCTGGCCGAGGCGCTGGAGCGCC GCCTGCAGGCCGAGGGGCGCGCGCTGGATGTGTACGTGCAGGTCAATACTTCGGGCGAGGCCAGCAAGTACGGCCTGCAT CCGGACGAGGCGGCGGCCTTCATCCGCCAACTGCCGAGCTACGGCGCGCTGCGTGTGCGCGGGCTGATGACGCTGGCGGT GCTGTCGGCCGACGCCGCGCGCGTACGGCAGTGCTTCGTGCTGCTGCGTACCTTGCGCGACCGCCTGCGGCAGGAAGCGC CGGCCGGCGTGAGCCTGGACGAGCTGTCCATGGGCATGTCGGGCGACTACGAGATCGCCATCGAGGAAGGCGCCACCGTG GTGCGGGTCGGCCAGGCGATCTATGGCGCGCGCGCCTTGCCCAACGATTATTACTGGCCCGACAGCGGCGCGGCGGACCG GGCGGAGGACGAATGA Protein sequence : MHADTAQDAPDAAARYPRADSVADFEHNLAAVRARMAAACQRAGRDPAGVRLLPVSKTVDEARIRMSYAAGCRELGENKV QEAYRKWEAMADLADLRWSVIGHLQTNKAKLVARFAAEFQALDSVRLAEALERRLQAEGRALDVYVQVNTSGEASKYGLH PDEAAAFIRQLPSYGALRVRGLMTLAVLSADAARVRQCFVLLRTLRDRLRQEAPAGVSLDELSMGMSGDYEIAIEEGATV VRVGQAIYGARALPNDYYWPDSGAADRAEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1555 | YP_005681817.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 5e-40 | 55 |
| CpC231_1557 | YP_005683917.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 5e-40 | 55 |
| cpfrc_01564 | YP_003783964.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-40 | 55 |
| CpI19_1562 | YP_005686005.1 | Pyridoxal phosphate enzyme, YggS family | Not tested | PiCp 6 | Protein | 5e-40 | 55 |
