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Name : tex (BP1144) Accession : NP_879920.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : transcription accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1207526 - 1209901 bp Length : 2376 bp Strand : - Note : Identical to the previously sequenced Bordetella pertussis Tex protein SW:TEX_BORPE (Q45388) (791 aa) fasta scores: E(): 0, 99.36% id in 791 aa, and to Escherichia coli protein YhgF or B3407 SW:YHGF_ECOLI (P46837) (773 aa) fasta scores: E(): 5.2e-166, 61. DNA sequence : ATGCCTGAAACCTCCGCTACCACGAACGCCGCACCGGGCGTCGATCACGCCCGGATCATTGCCCAACTGGCCACCGAAAT CGGCGCCCGAGCCTCGCAGGTCGCCTCGGCCGTGGAACTGCTGGACGACGGCGCCACCGTGCCGTTCATTGCCCGCTACC GCAAGGAAGCCACCGGCGGGCTGGACGACGGCGCCCTGCGCACCCTAGAGGTGCGCCTGGGCTACCTGCGCGAACTCGAA GAGCGCCGCGGCGCGATCCTGGAGTCCATCACGCAGCAGGGCAAGCTGACGCCCGAACTGCAGCAGGAAATCGCCACGGC TGAGACCAAGCAGCGCCTGGAAGACCTGTACGCGCCCTACAAGCCCAAGCGCCGCACGCGCGCCCAGATCGCCCGCGAAG CCGGCCTCGAGCCGCTGGCCGACGCCATCCTGGCCGATCCGGCCTGCGATCCCGCGGCGCTGGCGGCGCAGTACCTCAAC CCGGAAGCCTCGATCAACGACGCCAAGGCGGCCCTCGACGGCGCGCGCGATATCCTGGCCGAGCGCCATGCCGAGAACGC CGACCTGCTGGCCGACATCCGCGAGCATCTGTGGAGCACCGGCCTGCTCTATTCGAAAATGGTCGAGGGCAAGGAAACCG ACGGCGCGAACTTCCGCGACTGGTTCGATTTCAACGAGCCGCTGCGCACGCTGCCTTCGCACCGCATCCTGGCGCTGATG CGCGGCCGCCAGCAAGGCGTGCTGGAATTGCGCGTGGGCCTGGAAGCCGACCTCGAGGCCGAGACGCCCCACCCCTGCGT GGTGCGCATCGCCTCGTTTCTCAAGCTGGGCAACGGCCTGTTCGCCCTGGACGCCACGCCGCGCGCGCGCTGGCTGGGCG AGGTATGCCGCTGGACGTGGCGCGTCAAGCTGCTGACGGCATTCGAAAGCGAATTGTTCGGCCGCCTGCGCGAAAGCGCC GAAGCCGAGGCCATCCGCGTGTTCGCCGCCAACCTGAAGGATTTGCTGCTGGCCGCGCCGGCGGGCCCCAAGACGGTACT GGGGCTGGACCCCGGCATCCGCACCGGGTGCAAGGTGGCGGTCATCGACCGCACCGGCAAGGTCGTCGATACGGCCACGG TCTACCCGTTCGAGCCGCGCCGTGACCGCGAAGGCACCATCAAGACGCTGGCGGCCCTGGCGGCGCGCCACAAGGTCGAG CTCATCGCCATCGGCAACGGCACCGCCTCGCGCGAATCCGAAAAGCTGGTCGGCGACATGATGGCCCGCTTTCCCGACCT CGCGTTGACGCGCGTGGTGGTCTCCGAGGCCGGCGCCTCGGTGTACTCGGCCTCGGAAACGGCCGCGCTCGAATTCCCCG ACCTGGACGTGACGCTGCGCGGCGCCGTCTCGATCGCCCGCCGCCTGCAGGATCCTTTGGCCGAACTGGTCAAGATCGAT CCCAAGGCGATCGGCGTGGGCCAGTACCAGCACGACGTCAACCAGCGCGAGCTGGCCCGTTCGCTGGATGCGGTGGTCGA GGACTGCGTGAACGCCGTGGGCGTGGACGTCAACACCGCCTCGGCGGCGCTGCTGGCGCGCGTCTCGGGGCTGAACACGC TGCTGGCCAAGAACATCGTGGCCTGGCGCGACGAGAACGGCGCCTTCCCCACCCGCGACATGCTGCGCAAGGTGCCGCGC TTCGGCGAGAAGGCTTTCGAGCAGGCCGCCGGCTTCCTGCGCATTCCCAACGGCGACAATCCGCTCGATGCCTCGGCGGT GCACCCGGAGGCCTATCCCGTGGTGGAGCGCATCGTCGCGCGCATCAAGGCCGACGTACGGCACATCATCGGCCAGCGCG AGGCGCTCAAGGGCGTGTCGCCCAGCGACTTCACCGACGAGCGCTTCGGGCTGCCCACGGTGCGCGACATCTTCGCCGAG CTGGAAAAGCCCGGCCGCGATCCGCGCCCGGAATTCAAGACCGCGCAGTTCAAGGAAGGCGTCGAAACCCTCAACGACCT GTTCCCCGGCATGGTGCTCGAAGGCGTGGTGACCAACGTCGCCAATTTCGGCGCCTTCGTGGACATCGGCGTGCACCAGG ACGGGCTGGTCCATATTTCGGCGCTGGCCGAGAAATTCGTCAAGGATCCGCGCGACGTCGTGCGCGTGGGCCAGACCGTG ACCGTCAAGGTGCTCGAGGTCGACGTGGCGCGCAAGCGCGTGGCCCTCACCATGCGCCTGAACGATGCCGCCGAGCCGGC CCGCCGTGGCAATGGCGCGGGAGCCGGGGCCGCGCGCGGCGCCGATCGGGGCGCCCGCCGTCCGCAGGCGGACAACGGCA AGGGCGCGCCGGCCAACAGCGCCATGGCCGACGCCTTCGCCAAACTCAAGCGCTGA Protein sequence : MPETSATTNAAPGVDHARIIAQLATEIGARASQVASAVELLDDGATVPFIARYRKEATGGLDDGALRTLEVRLGYLRELE ERRGAILESITQQGKLTPELQQEIATAETKQRLEDLYAPYKPKRRTRAQIAREAGLEPLADAILADPACDPAALAAQYLN PEASINDAKAALDGARDILAERHAENADLLADIREHLWSTGLLYSKMVEGKETDGANFRDWFDFNEPLRTLPSHRILALM RGRQQGVLELRVGLEADLEAETPHPCVVRIASFLKLGNGLFALDATPRARWLGEVCRWTWRVKLLTAFESELFGRLRESA EAEAIRVFAANLKDLLLAAPAGPKTVLGLDPGIRTGCKVAVIDRTGKVVDTATVYPFEPRRDREGTIKTLAALAARHKVE LIAIGNGTASRESEKLVGDMMARFPDLALTRVVVSEAGASVYSASETAALEFPDLDVTLRGAVSIARRLQDPLAELVKID PKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDVNTASAALLARVSGLNTLLAKNIVAWRDENGAFPTRDMLRKVPR FGEKAFEQAAGFLRIPNGDNPLDASAVHPEAYPVVERIVARIKADVRHIIGQREALKGVSPSDFTDERFGLPTVRDIFAE LEKPGRDPRPEFKTAQFKEGVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTV TVKVLEVDVARKRVALTMRLNDAAEPARRGNGAGAGAARGADRGARRPQADNGKGAPANSAMADAFAKLKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
