Gene Information

Name : BPP0792 (BPP0792)
Accession : NP_883124.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine C4 epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 847863 - 848888 bp
Length : 1026 bp
Strand : +
Note : ortholog of Bordetella pertussis (BX470248) BP3149

DNA sequence : 
ATGACGAATCGCTTTGAGACCACGTGCGCGCAGTTGCGGGCCCAACCCCAGAAATGGCTGGTGACCGGCTGCGCCGGCTT
CATCGGCTCGAACCTGCTCGAGACGCTGCTCGGGCTGGACCAGGCGGTGGTGGGGCTGGACAACTTCGCCACGGGGCACC
AGCACAACCTGGACGAGGTGCGCGCGGCGGTGACGCCCGAGCAATGGGCGCGCTTCACCTTCATCGAAGGCGACATCCGC
GACCTGGCGGCCTGCCAGCGCGCCGTGCAGGGCGTGGACCGGGTGCTGCACCAGGCCGCGCTGGGTTCGGTGCCGCGTTC
GCTGAAAGACCCGATCACGACCAACGAGGTCAACATCGGCGGTTTCCTGAACATGCTGGTGGCCGCGCGCGACGCGCAGG
TCCAGGCGTTCGTCTATGCGGCCTCGAGCTCGACCTACGGCGACCATCCCGACCTGCCCAAGGTCGAGGAGCGCATCGGC
AATCCGCTCTCGCCGTACGCGGTGACCAAGTACGTCAACGAGCTGTACGCCGACGTGTTCGCGCGCTCGTACGGGTTTTC
CAGCGTGGGGCTGCGCTACTTCAACGTGTTCGGCAAGCGCCAGGACCCGGACGGCGCGTACGCGGCGGTGATTCCGAAGT
GGACGGCGGCGATGATCAAGGGCGAGGACGTCGTGATCAACGGCGACGGCCAGACCAGCCGCGACTTCTGCTTCGTGGAG
AACGCGGTGCAGGCCAACCTGCTGGCGGCGATGGCCGCACCGGAAGGCGCGAACCAGGTCTACAACGTGGCGTACAACGC
GCGCACGACGCTGACCGAGCTGTTCGAGCACCTGCGGCGCGCGCTGGCCGGGCAGGGCGTGTCGTACGAGAAGGCGCCGG
TGTACGCGGAATTCCGCGCCGGCGACGTGCGCCACTCGCAGGCCGACATCGGCAAGGCCGGCAAGCTGCTGGGCTACGAG
CCGGCCTACGACATCCTGCGCGGGCTGGAAGCCGCCATGCCCTGGTACACGCAATTCCTGCGTTGA

Protein sequence : 
MTNRFETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAVTPEQWARFTFIEGDIR
DLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIG
NPLSPYAVTKYVNELYADVFARSYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVE
NAVQANLLAAMAAPEGANQVYNVAYNARTTLTELFEHLRRALAGQGVSYEKAPVYAEFRAGDVRHSQADIGKAGKLLGYE
PAYDILRGLEAAMPWYTQFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-98 63
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-98 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPP0792 NP_883124.1 UDP-N-acetylglucosamine C4 epimerase VFG0430 Protein 6e-99 63