|
Name : BPP0779 (BPP0779) Accession : NP_883112.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 831992 - 833650 bp Length : 1659 bp Strand : - Note : ortholog of Bordetella pertussis (BX470248) BP3162 DNA sequence : ATGCCCTACGCCCCCTACCCTCCGGCCGGCGACACCAGCGCCGCGGTGCTGGCGATCCGCAACCTGTCGGTGAGCGTCTG CGGCGCGGGCAACCGCGTGGTCCGCAACCTCAGCCTGGACGTGCACGCCGGCGAGACGGTCTGCGTGGTGGGCGAATCCG GGTCGGGCAAGTCGGTCACGTCGCTGGCGGTCATGGGATTGCTGCCCGAGGGCATCCTGGAGGTCTCCGGCGGCTCGGCC CGCGTGCTGGGCGAGGACATCGTCACGGCCAGCGCGCGGCGGCGGCGCGAACTGCGCGCCACGCGCATGGCCATGGTGTT CCAGGAGCCCATGACCGCGCTCAACCCGGTGCACCGGGTGGGCAGCCAGGTCGACGAAGTGCTGCGCCTGCACCGCCGCA TGCCGCGCGCGCAACGGCGCGCCAAGGTGCTCGAAATGTTCCGCTCGGTGCACCTGCCCGACGTGGAGCGCATCTACGAC GCGTATCCGCACCAGCTCTCGGGCGGCCAGCGCCAGCGCATCGTCATCGCCATGGCGCTGATCCTCGAACCCAAGCTGCT GATCGCCGACGAACCCACCACGGCGCTGGATGTCACGACGCAGAAACAGATCCTGGCGCTGATCCGCGAACTGCAGGACA GGCACCAGACCGCCGTGCTCTTCATCACGCACGACTTCGGCGTGGTGGCCGAAATCGCCGACCGTATCGTCGTCATGAAC CGCAGCGACCTCACCGAGGCCGGCACGCGCGACGAGATCCTGGCGCGGCCGAGCCAGAACTACACCCGCCGCCTGGTGTC GTCGGTGCCCAGCCTGGTGCCGACGCAGCGCGAGGCGCCAGGCGGCGAACCGGTGCTGCGCATCACCGGGCTGGGCCGCA CCTACGCCGAGCGGCGCTCGCTCTTCGGCGCGACGCGCACGGTGGTGGCCGCCAGCGAGGTGGACCTGACCCTGCGGCGC GGCGAGATCCTCGGCATCGTCGGCGAATCGGGTTCGGGCAAGTCCACGGTGGCGCGCTGCATCGTGCGCCTGATCGAGCC CAGCGCCGGCCGCATGCTGCTGGGCGAAACCGACATCGCGCGCCTGAGCGGCGCGGGCCTGCGTCCGCTGCGGCGCAAGG TGCAGATCGTGTTCCAGGACCCCTACCGGTCGCTGAACCCGCGCCGCGCGGTGGGCGAGTCCATCATCGAGGGCCTGCTC AACTTCGGCATGCCGCGCGCGCAGGCGCTGGTGCGCGCCGCCCGCACCCTGGGCGTGGTCGGCCTCGGTCCCGACGTGAT GCGGCGCTACCCGCACCAGTTCTCGGGCGGCCAGCGCCAGCGCCTTTGCATCGCGCGCGCCCTGGTCATGGACCCCGAAG TGCTGGTGGCCGACGAAGCCGTTTCGGCGCTGGATGTATCGGTGCAGGCGCAGGTGCTGGAGCTGATCGAGCAGGTGCGC GAACGTACCGGCGTGAGCGTGCTGTTCATCACGCACGACCTGCGCGTGGCGGCGCAGGTGTGCGACACCATCGCGGTCAT GCAGCATGGCAAGGTGGTGGAGACCGGCGCGGCGCAGACGGTGCTGACCCGGCCCGGCCATGCGTATACCCGCGCCCTGA TCGACGCCGCGCCGGGCCGCGGCTGGGATTTCCGCAATTTCCGCCCGCTGCCCGCCTGA Protein sequence : MPYAPYPPAGDTSAAVLAIRNLSVSVCGAGNRVVRNLSLDVHAGETVCVVGESGSGKSVTSLAVMGLLPEGILEVSGGSA RVLGEDIVTASARRRRELRATRMAMVFQEPMTALNPVHRVGSQVDEVLRLHRRMPRAQRRAKVLEMFRSVHLPDVERIYD AYPHQLSGGQRQRIVIAMALILEPKLLIADEPTTALDVTTQKQILALIRELQDRHQTAVLFITHDFGVVAEIADRIVVMN RSDLTEAGTRDEILARPSQNYTRRLVSSVPSLVPTQREAPGGEPVLRITGLGRTYAERRSLFGATRTVVAASEVDLTLRR GEILGIVGESGSGKSTVARCIVRLIEPSAGRMLLGETDIARLSGAGLRPLRRKVQIVFQDPYRSLNPRRAVGESIIEGLL NFGMPRAQALVRAARTLGVVGLGPDVMRRYPHQFSGGQRQRLCIARALVMDPEVLVADEAVSALDVSVQAQVLELIEQVR ERTGVSVLFITHDLRVAAQVCDTIAVMQHGKVVETGAAQTVLTRPGHAYTRALIDAAPGRGWDFRNFRPLPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 7e-94 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-80 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-80 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-80 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-80 | 41 |
