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Name : ctaD (BPP4242) Accession : NP_886371.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : cytochrome c oxidase polypeptide I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 4576558 - 4578165 bp Length : 1608 bp Strand : - Note : ortholog of Bordetella pertussis (BX470248) BP3743 DNA sequence : ATGAGCAGCGTCACTGTAGACCACGTGTCGCCGGGCCACGGCCACGGTCACGATGACCACCACCACGCCATGCCGAGCGG CTGGCGCCGCTGGCTTTTCGCTACCAACCACAAAGATATCGGGACGATGTATCTCATCTTCTCGTTCTTCATGCTGATGG AAGGCGGCGTGCTGGCCCTGTTGCTGCGCACCGAGCTGTTCGAGCCCGGTCTGCAGTTCTTCCGCCCCGAACTGTTCAAC CAGTTCACCACCATGCACGGCCTGATCATGGTGTTCGGCGCCGTCATGCCGGCGTTCGTGGGCTTCGCCAACTGGATGAT CCCGCTGCAGATCGGCGCCTCCGACATGGCGTTCGCCCGCATGAACAACTTCAGCTTCTGGCTGCTGCCGGTCGCCGGCA TCATGCTGACGGTGTCGTTCTTCGTGCCCGGCGGCGCCACCGCCGCCGGCTGGACGCTGTATGCGCCGCTGTCGGCCCAG ATGGGCCCCGGCATGGACCTGGCCATCTTCGCGCTGCACATCATGGGCGCCTCGTCCATCATGGGCGCGATCAACATCAT CGTCACGGTGCTGAACATGCGCGCGCCCGGCATGACGCTGATGAAGATGCCGCTGTTCTGCTGGACCTGGCTGATCACCG CGTTCCTGCTGATCGCGGTGCTGCCGGTGCTGGCCGCTGCCATCACTATGGTGCTGACCGACCGCCACTTCGGCACCGGC TTCTTCAACGCGGCCGCCGGCGGCGACCCGGTGCTGTACCAGCACGTGTTCTGGTTCTTCGGGCACCCCGAGGTCTACAT CATGATCCTGCCGGCGTTCGGCATCGTGTCGGCCATCGTGCCGGCCTTTGCCCGCAAGCAGCTGTTCGGCTATGCGTCGA TGGTGTACGCCACCGCCGCCATCGCCATTCTGGCGTTCATCGTCTGGGCGCACCACATGTTCACCACGGGCATGCCGGTG ACCGGGCAGCTGTACTTCATGTACGCCACCATGCTGATCTCGATCCCGACCGGGGTGAAGGTGTTCAACTGGGTGGCCAC CATGTGGCGCGGCTCGATGACCTTCGAGACGCCGATGCTGTTCTCGGTGGGCTTCATCTTCGTGTTCACCATCGGCGGCT TCACCGGCCTGATCCTGTCGGTCGCGCCGATCGACATCCAGGTGCACGACACCTACTACGTGGTGGCGCACTTCCACTAC GTGCTGGTGGCGGGCTCGCTGTTCGCGCTGTTCGCCGGCACGTACTACTGGCTGCCCAAGTGGACCGGCCGCATGTACAG CGAGAAGCTGGGCAAGCTGCATTTCTGGTCGTCGATGATTTCGTTCAACATCACCTTCTTCCCGATGCACTTCCTGGGCC TGGCCGGCATGCCGCGCCGCTACGCCGACTACGCCGCGCAGTTCACCACCTTCCACCAGCTGGCCACGATCGGCGCGTTC TGGTTCGGCCTGTCGCAGCTGATCTTCCTGTGGGCCGTGCTGCGCTGCTACCGCGGCAAGGGCGAAGTGGCCTCGGCCAA GCCCTGGGAAGGCGCCGAAGGCCTGGAGTGGACCGTGCCGTCGCCGGCGCCGTTCCATACCTTTGAAACCCCGCCCGAAG TAAAGTAA Protein sequence : MSSVTVDHVSPGHGHGHDDHHHAMPSGWRRWLFATNHKDIGTMYLIFSFFMLMEGGVLALLLRTELFEPGLQFFRPELFN QFTTMHGLIMVFGAVMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLLPVAGIMLTVSFFVPGGATAAGWTLYAPLSAQ MGPGMDLAIFALHIMGASSIMGAINIIVTVLNMRAPGMTLMKMPLFCWTWLITAFLLIAVLPVLAAAITMVLTDRHFGTG FFNAAAGGDPVLYQHVFWFFGHPEVYIMILPAFGIVSAIVPAFARKQLFGYASMVYATAAIAILAFIVWAHHMFTTGMPV TGQLYFMYATMLISIPTGVKVFNWVATMWRGSMTFETPMLFSVGFIFVFTIGGFTGLILSVAPIDIQVHDTYYVVAHFHY VLVAGSLFALFAGTYYWLPKWTGRMYSEKLGKLHFWSSMISFNITFFPMHFLGLAGMPRRYADYAAQFTTFHQLATIGAF WFGLSQLIFLWAVLRCYRGKGEVASAKPWEGAEGLEWTVPSPAPFHTFETPPEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 2e-101 | 49 |
