|
Name : ctaD (BPP4204) Accession : NP_886335.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : cytochrome c oxidase polypeptide I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : - Position : 4534980 - 4536575 bp Length : 1596 bp Strand : - Note : - DNA sequence : ATGAGTACCATTGTCCACGATCACAGTCCTTCGGCCGGCCATGCCGACCATCACGCCGCGCCCAGCGGGTGGCGACGATG GTTGTTCGCGACCAACCACAAGGACATCGGGACGATGTACCTGATCTTCTCGCTGGTGATGCTCATGGTGGGCGGCGTGC TGGCGCTGGCCGTGCGTACCGAGCTGTTCGAGCCGGGCCTGCAGTTCTTCCGCCCCGAGCTGTTCAACCAGTTCACCACC ATGCACGGCCTGATCATGATCTTCGGGGCCATCATGCCGGCGTTCGTGGGCTTCGCCAACTGGATGATCCCCTTGCAGAT CGGCGCCTCCGACATGGCGTTCGCCCGCATGAACAACTTCAGCTTCTGGCTGCTGCCGGTGGCTTCGGTGCTCCTGCTCA GTTCGTTCTGGGTCGACGGCGGCGCCACCGCCGCCGGCTGGACGCTGTACGCGCCGCTGTCGCTGCAGATGGGCCCGGGC ATGGACCTGACCATTTTCGCGGTGCACATCATGGGCGCCTCGTCCATCATGGGCGCGATCAACATCATGGTGACCATCCT CAACATGCGCGCGCCCGGCATGACGCTGATGCGCATGCCGCTGTTCTGCTGGACCTGGCTGATCACCGCGTTCCTGCTGC TGGCCGTGATGCCGGTGCTGGCGGCGGGCATCACCATGCTGCTGACCGACCGCCATTTCGGCACCGGCTTCTTCAACGCG GCGGCGGGCGGCGACCCGGTGATGTACCAGCACGTGTTCTGGTTCTTCGGGCATCCCGAGGTCTACATCATGATCCTGCC GGCCTTCGGCATCGTATCGGCCGTGGTGCCGGCGTTCTCGCGCAAGAAGCTGTTCGGCTATGCATCCATGGTGTACGCCA CGGCGTCGATCGCGGTGCTGTCGTTCCTGGTGTGGGCGCACCACATGTTCACCACGGGCATCCCGGTGGTCGGCCAGCTG TTCTTCATGTACGCCACCATGCTGATCTCGATCCCGACCGGCGTGAAGGTGTTCAATTGGGTGGCCACCATGTGGCGCGG CTCGCTCAGCTTCGAGACGCCGATGCTGTTCGCGGTGGGTTTCATCTTCGTGTTCACGGTCGGCGGCTTCACCGGCCTCA TCCTGGCGGTGGCGCCGATCGACATCCAGGTGCACGACACCTACTACGTGGTGGCGCACTTCCACTACGTGCTGGTGGCG GGCTCGCTGTTCGCGCTGTTCGCCGGCGCGTATTACTGGCTGCCCAAATGGACCGGCCGCATGTACGACGAGAAGCTGGG CAAGCTGCACTTCTGGTCCACCATGATCTCGTTCAACGTGACCTTCTTCCCGATGCACTTCCTGGGCCTGGCCGGCATGC CGCGCCGCTACGCCGACTACGCCGCGCAGTTCACCACCTTCCACCAGGTGGCCACCATCGGCGCGATCTGGTTCGGCCTG TCGCAGTTCATCTTCGTCTGGGCGGCGCTGCGCTGCTACCGCGGCAAGGGCGAGGTGGCCACGGCCAAGCCGTGGGACGG CGCCGAGGGGCTGGAGTGGACCGTGCCGTCGCCCGCGCCGCATCATACGTTCGTGACGCCGCCCGAGGTCAAGTAG Protein sequence : MSTIVHDHSPSAGHADHHAAPSGWRRWLFATNHKDIGTMYLIFSLVMLMVGGVLALAVRTELFEPGLQFFRPELFNQFTT MHGLIMIFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLLPVASVLLLSSFWVDGGATAAGWTLYAPLSLQMGPG MDLTIFAVHIMGASSIMGAINIMVTILNMRAPGMTLMRMPLFCWTWLITAFLLLAVMPVLAAGITMLLTDRHFGTGFFNA AAGGDPVMYQHVFWFFGHPEVYIMILPAFGIVSAVVPAFSRKKLFGYASMVYATASIAVLSFLVWAHHMFTTGIPVVGQL FFMYATMLISIPTGVKVFNWVATMWRGSLSFETPMLFAVGFIFVFTVGGFTGLILAVAPIDIQVHDTYYVVAHFHYVLVA GSLFALFAGAYYWLPKWTGRMYDEKLGKLHFWSTMISFNVTFFPMHFLGLAGMPRRYADYAAQFTTFHQVATIGAIWFGL SQFIFVWAALRCYRGKGEVATAKPWDGAEGLEWTVPSPAPHHTFVTPPEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 3e-96 | 49 |
