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Name : BPP4160 (BPP4160) Accession : NP_886293.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : short chain dehydrogenase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 4494730 - 4495494 bp Length : 765 bp Strand : - Note : Similar to Bacillus megaterium glucose 1-dehydrogenase SWALL:DHG_BACME (SWALL:P40288) (261 aa) fasta scores: E(): 9.5e-23, 35.36% id in 246 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase PA3128 SWALL:Q9HZ96 (EMBL:AE004737) (248 aa) f DNA sequence : ATGATCGACCACTTGTCTCCCAACAAAGTCATGATCGTCACGGGCGCGGCGCGCGGCATCGGCGCCGCCGTGGCGCTGCT GGCGGCGCGCCGCGGCTACGCCGTCTGCGTCAACTACCGGTCGCGCGGCGACGCCGCCGAGCAGGTGGTGCAGGCCATCC GCGACGAAGGCGGACGAGCCCTGGCCGTGGCCGCCGACGTGGCCGACGAGGCCCAGGTCGTGCGGATGTTCGAAACCGTC GACCGCGAGCTGGGCCGGGTCGACGCGCTGGTCAACAATGCCGGCATCCTCGAGGCGCAGATGCGCGTCGAGGAGATGGA CGCGGCCCGCATCACTCGCATACTCGCCACCAACGTGGTGGGCGCCTTCGTCTGTTGCCGCGAAGCCGTGCGCCGCATGG CGCCGCGCCATGGCGGACGCGGCGGCGCCATCGTCAACGTGTCTTCGGTGGCCGCGCGGCTGGGCTCGCCGGGCGAGTAT GTCGATTACGCCGCCTCCAAGGGCGCGCTGGATACGCTGACCATCGGCCTGTCGCGCGAGGTGGCCGCCGACGAGATCCG CGTCAACGCGGTGCGTCCGGGCACCATCTACACCGATATGCACGCCAGCGGCGGCGAGCCGGGGCGCGTCGACCGGCTCA AGGACGGCATTCCGTTGCGGCGCGGCGGCACCGTGCAGGAAGTGGCCGGCGCGGTGATGTGGTTTTTTTCCGATGAGGCC GGCTACACGACCGGGTCGTTCATCGAGGTTTCAGGCGGCAAATGA Protein sequence : MIDHLSPNKVMIVTGAARGIGAAVALLAARRGYAVCVNYRSRGDAAEQVVQAIRDEGGRALAVAADVADEAQVVRMFETV DRELGRVDALVNNAGILEAQMRVEEMDAARITRILATNVVGAFVCCREAVRRMAPRHGGRGGAIVNVSSVAARLGSPGEY VDYAASKGALDTLTIGLSREVAADEIRVNAVRPGTIYTDMHASGGEPGRVDRLKDGIPLRRGGTVQEVAGAVMWFFSDEA GYTTGSFIEVSGGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf29 | AAO17195.1 | Orf29 | Not tested | tcd island | Protein | 5e-57 | 61 |
| VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 1e-56 | 60 |
