|
Name : BPP3871 (BPP3871) Accession : NP_886023.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 4191232 - 4192392 bp Length : 1161 bp Strand : - Note : ortholog of Bordetella pertussis (BX470248) BP2948; riboflavin-specific deaminase DNA sequence : GTGAATACCTCCACGCCCACCGACGACGTTTCCTGGATGCGGCGCGCCCTGGCACTGGCGCGTTCGGTCATGTACAGCAC GGCCCCCAATCCGCGCGTGGGCTGCGTCATCGTGCGCGACGGGCAGGTGCTGGGCGAGGGCGCCACGCAGCCGCCAGGCG GTCCGCACGCCGAGGTGTGCGCGCTGCGCGAGGCCGCCGCGCGCGGCGCTTCGCTGGCCGGCGCCACCGTGTACGTGACG CTGGAGCCATGCAGCCATTTCGGCCGCACGCCGCCGTGCGTCGATGCCCTGGCGGCGGCGGCGCCGGCGCGCGTGGTGGT CGCCATGGGCGACCCCAATCCGCGCGTCAACGGCCAGGGCCTGGCGCGGCTGCGCGCCGCCGGCATCGCGGTGACCGAGG ACGTGTGCCGCGACGAGGCGCTGGAACTGAACGCGGGCTTCGCGGCGCGCATGAGCCGCGGCCTGCCGTGGGTCTGGCTG AAGCTGGCCGCCTCGCTGGACGGGCGCAGCGCCCTGCACAACGGCGTGTCGCAGTGGATGACCGGCGAAGCCGCGCGCGC CGATGGCCACCACTGGCGCGCCCGCAGCGGCGTGGTGCTGACCGGCATGGGCACGGTGCTCAAGGACGATCCGCAATTGA ATGCGCGCGCGGTGCAGACCAGCCATCCGCCGCGCAAGGCGGTCATCGATGGCCGCTTCGAAATCCCCGAGGACGCGCGC CTGTTCGACGACGGGGCGCAAGTGCTGGTTTTCACGGCCCGCTCCGATGCGGCCAAGGCGCGCCGCATGGCCGACCGCAA CGTGCGCGTGATCGAACTGCCGGGCGTGCGCCCGGACCGCGTCGACCTGCCCGCCGTGATGCGTTGGCTGGCCAGCCAGG AAATCAACGAAGTGCACGTGGAAGCGGGGGCCGGATTGTCAGGCGCGCTGCTTGCTGAGGATTGCGTGGACGAGTTGCTG GTGTATCTGGCGCCCGTCCTGCTGGGCGACGCGGCGGGCATGGTACGACTGCCCTTGCTCGAACATCTCGATGGGGCGCG CCGCTTCGAATTCGCCGAACTGGCTCCGGTAGGCACCGATGTGCGCCTGCGAGCCCGGGTGGCGTCGCGCTGGCGCGCGC TGCAAGACAGCGTGAGCGCCGCGTCGCGACAGCGCGGATAA Protein sequence : MNTSTPTDDVSWMRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVCALREAAARGASLAGATVYVT LEPCSHFGRTPPCVDALAAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVTEDVCRDEALELNAGFAARMSRGLPWVWL KLAASLDGRSALHNGVSQWMTGEAARADGHHWRARSGVVLTGMGTVLKDDPQLNARAVQTSHPPRKAVIDGRFEIPEDAR LFDDGAQVLVFTARSDAAKARRMADRNVRVIELPGVRPDRVDLPAVMRWLASQEINEVHVEAGAGLSGALLAEDCVDELL VYLAPVLLGDAAGMVRLPLLEHLDGARRFEFAELAPVGTDVRLRARVASRWRALQDSVSAASRQRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-51 | 43 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-51 | 43 |
