Gene Information

Name : BPP3677 (BPP3677)
Accession : NP_885834.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 3975590 - 3977242 bp
Length : 1653 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP0723

DNA sequence :
ATGATATTTCGCAAGCGCGATCTCCAACATCGCCCGGTGGTGCTGCGCATCGCGGGCCTGTCCCTGGTGGACGGGCAGCC
GGGCGCCGGCAGCGCCATCCTGCGGGATATCGACGTCGATATCCGGCAGGGCGAGACGGTCTGCCTGGTGGGCGAAAGCG
GCTCGGGCAAGTCCATGACCTCGCTGGCGGTCATGGGCCTGCTGCCCAAGGGGCATCTGCGGGTGACAGGCGGACGCATC
GAACTCGATGGCCAGAACCTGCTCGACCTCGGGCCGGCCGCCTTGCGGGACTTGCGCGCCAAGCGCATTTCCATGATTTT
CCAGGAGCCCATGACGGCCCTGAACCCGGTCATGAAGGTGGGGCCGCAGATCGAAGAGGTGCTGGACAGCCACACGGCGC
TGCCCAGGCGCGAGAAGAAGCAGCGCGTGCTCGACATCATGGAGCAGGTCCACCTGTCCGACGTGGCGCGTATCTACGAG
TCCTATCCGCACCAGCTCTCCGGCGGGCAGCGCCAGCGCATCATGATCGCCATGGCGCTGGTGCTGGAGCCACGGCTGCT
GATCGCCGACGAGCCGACCACCGCGCTGGACGTCACCACGCAGAACCAGGTGCTCAAGCTGATCAGCGAGCTGCAGCACA
AGCACGATACGGCGGTGCTGTTCATCACCCATGACATGGGGGTGGTGGCCGAGATCGCCGACCGGGTCTATGTCATGCGC
CTGGGCGAAATCGTCGAGAGCGCGCCGGTCGAGCAATTGTTGCGCGAACCGCGGCAGGACTACACCCGCAAGTTGCTCAA
GTCGGTGCCCAGCCTGATTCCGCGGCCCGGCCGGGCCGCGCCGCAGGCGTGCGCCACGCTGCAGGTGCAGGGGCTTGCGA
AACGCTATGCGATGGGCGGGTTCCCGGGCCGCCGGCGGGAAGTCCAGGCCGCGCACGATGTCGCGTTCAGCATCCAGCCC
GGCCGTACGCTGGGCATCGTGGGCGAGAGCGGCTCGGGCAAGTCCACGGTGGCGCGCTGCGTGATGCGGCTGATCGAGCC
GAGCGAAGGCGCCATCCGTGTCGGCGATGCCGATATCGCGCGGCTGGGCCCCAGGCAGCTCAAGCCGTTTCGCAAGCATC
TGCAGATCGTCTTCCAGGATCCGTACCGTTCGCTCAACCCCCGCCGCACCATCGGCGCCAGCCTGATCGAAGGGCCGGTG
AACTTCGGGCAGGACAGGCAGGCCGCGCTGGCGCAGGCGGCCGAATTGCTGGAGCTGGTGGGCCTGCCGGCCGACGCCCT
GGCGCGCTATCCCCATCAGTTCTCGGGCGGGCAGCGGCAGCGCATCGCCATCGCGCGCGCCATCGCCATGCGGCCCGACG
TCCTGGTGGCCGACGAGGCGGTGTCCGCGCTCGATGTCTCGGTACAGGCGCAGGTGCTCGAATTGCTCGACACGCTGCAG
CGCAAGCTGGACATCGCGATTCTGTTCATCACGCACGATCTGCGGGTGGCCACGCAGATCTGCGACGAGGTCATGGTGAT
GCGGCATGGCCGCGTGGTGGAGCACGACACGGCCGAGAATGTCCTGGCGCGGCCCGCGCACGCCTACACGCGCGCGTTGA
TCGAGGCCGCGCCGGGACGCGATTGGGACTTTGCCAACTTTCGCGAACGGTAG

Protein sequence :
MIFRKRDLQHRPVVLRIAGLSLVDGQPGAGSAILRDIDVDIRQGETVCLVGESGSGKSMTSLAVMGLLPKGHLRVTGGRI
ELDGQNLLDLGPAALRDLRAKRISMIFQEPMTALNPVMKVGPQIEEVLDSHTALPRREKKQRVLDIMEQVHLSDVARIYE
SYPHQLSGGQRQRIMIAMALVLEPRLLIADEPTTALDVTTQNQVLKLISELQHKHDTAVLFITHDMGVVAEIADRVYVMR
LGEIVESAPVEQLLREPRQDYTRKLLKSVPSLIPRPGRAAPQACATLQVQGLAKRYAMGGFPGRRREVQAAHDVAFSIQP
GRTLGIVGESGSGKSTVARCVMRLIEPSEGAIRVGDADIARLGPRQLKPFRKHLQIVFQDPYRSLNPRRTIGASLIEGPV
NFGQDRQAALAQAAELLELVGLPADALARYPHQFSGGQRQRIAIARAIAMRPDVLVADEAVSALDVSVQAQVLELLDTLQ
RKLDIAILFITHDLRVATQICDEVMVMRHGRVVEHDTAENVLARPAHAYTRALIEAAPGRDWDFANFRER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-94 45
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-79 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-79 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-79 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-79 42