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Name : scoA (BPP0359) Accession : NP_882713.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1788 EC number : 2.8.3.5 Position : 380043 - 380747 bp Length : 705 bp Strand : - Note : Similar to Helicobacter pylori succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A ScoA SWALL:SCOA_HELPY (SWALL:P56006) (232 aa) fasta scores: E(): 3.4e-48, 56.71% id in 231 aa, and to Ralstonia solanacearum probable fesuccinyl-CoA:3-ketoacid-coenzym DNA sequence : ATGACCAAGATTTTCGAAGACGCGGCCGCGGCATTGAGCGGCGTAATCAAGGATGGCCAGACCATCGCCGTGGGCGGCTT TGGCCTGTGCGGCATTCCTTCCACGCTTATCGAGGGCCTGCGCGACAGCGGCGTGGCCAACCTGACCTGCATCAGCAATA ACGCGGGCGTGGACGATTTCGGCCTGGGGCTGCTGCTGCAGACGCGCCAGATCAAGCGCATGATCGCCTCGTACGTGGGC GAGAACAAGGAATTCGAGCGCCAGTACCTCAACGGCGAGCTGGAGCTGGAATTCAATCCGCAGGGCACGCTGGTCGAGCG CCTGCGCGCCGGCGGCGCGGGCATCGCGGCCTTCTTCACCCGCACCGGGGTCGGCACCGTGGTCGAGGAGAACAAGGAAA CGCGCGACTTCGGCGGCGACACCTACGTCATGGAGCAGGCCCTCAAGGCGGATGTCTCGCTGGTCAAGGCGCAGCGGGCC GACACGTCGGGCAACCTCGTCTTCTCGCGCACCGCGCGCAACTTCAACCCCGAGGACGCGATGGCGGGCGGCGTCACCAT CGCCGAAGTCGAGGAGCTGGTGGAGGCGGGCGAGATGGACCCCGACGCGGTGCACCTGCCAGGCATTTTCGTGGACCGCA TCATCGTGGTGCCGAACCCGGAAAAGCGCATCGAACGCAAGAGTTTCCGTACGCGCGGTCAATAA Protein sequence : MTKIFEDAAAALSGVIKDGQTIAVGGFGLCGIPSTLIEGLRDSGVANLTCISNNAGVDDFGLGLLLQTRQIKRMIASYVG ENKEFERQYLNGELELEFNPQGTLVERLRAGGAGIAAFFTRTGVGTVVEENKETRDFGGDTYVMEQALKADVSLVKAQRA DTSGNLVFSRTARNFNPEDAMAGGVTIAEVEELVEAGEMDPDAVHLPGIFVDRIIVVPNPEKRIERKSFRTRGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 2e-36 | 48 |
