|
Name : BPP3262 (BPP3262) Accession : NP_885429.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3518558 - 3520468 bp Length : 1911 bp Strand : - Note : ortholog of Bordetella pertussis (BX470248) BP2397 DNA sequence : ATGGTTGATCGCGCAAACAGCCTGGCGATGCCGGAGAACCGCGTGGTTCAGGTCGAGGACCTGACGGTGCGTTTCGTCGG CGCCGAACGCACCGTGGAAGCGGTGCGCAACCTGTCCTTTCACGTCGACCGGGGCGAGACCCTGGCCATCGTGGGCGAAT CCGGCTCGGGCAAATCGGTGACCTCGCTGGCGCTGATGCGCCTGGTCGAGCATGGCGGCGGACGCATCGCCCAGGGGCGC ATCGCGCTGCGCCGCCGCAACGGCGACATCGTCGACCTGGGCGCGTCGTCGCAGCGGGCCATGCGCAGCGTACGCGGCGC CGACATGGCCATGATTTTCCAGGAGCCGATGACCTCGCTGAACCCGGTGTTCACCGCCGGCGAGCAGATTGCCGAAACCA TCCGGCTGCACCAGGGCAAGGACGCCGCGGCCGCGCGCGCCGAGGCGCTGCGCATGCTCGAGCAGGTGCGCATTCCCGAG GCGCGGTCGGTCATGGACCGTCATCCGCACCAGCTTTCCGGCGGCATGCGCCAGCGCGTGATGATCGCCATGGCGCTGGC CTGCAAGCCCGCGCTGCTGATCGCCGACGAGCCGACCACGGCGCTGGATGTCACGATCCAGGCGCAAATCCTGCAGCTGA TCCGCCAGCTGCAGGAGGAAATGCGCATGGGCGTCGTGTTCATCACCCACGACATGGGCGTGGTCGCCGAAGTGGCCGAC CGCGTGCTGGTGATGTATCGCGGCGACAAGGTGGAGGAGGGGCCTTCCGAACGCATCTTCGCCCAGCCCCGGCACCGCTA CACGCAGGCCTTGCTGTCGGCCGTGCCCAAGCTGGGCGCCATGCAGGGCACCGACCACCCGGCGCGTTTTCCGTTGCTGC GCGTCGACGAGTCCGCGGCCGCCGAGCCCGAGCCGCCGGCCACGCCTGCCGGGCCGGCCGCGCCGGCGCCTGCCGAGAGC GGGCCGGCCGGCGAGCGCCAGCCCATCCTCAGCGTGCGCGACCTGATCACCCGTTTCGACCTGCGCGGCGGCATCTTCAG CCGCGTGCAGCGGCGCGTGCACGCGGTCGAGAAAGTCAGCTTCGACCTCTACCCCGGCGAAACCCTGTCGCTGGTGGGCG AGTCGGGCTGCGGCAAGTCCACCACCGGGCGCTCGCTGCTGCGGCTGGTCGACAGCCAGGGCGGCCAGGTCCATTTCGGC GGGCGCGACATCACCAAGCTGAAGACCGCCGAGCTGCAAGCGCTGCGCCGCGATATCCAGTTCGTGTTCCAGGACCCCTT TGCTTCGCTCGATCCGCGCGTCACGGTGGGGTTCTCCATCATGGAGCCCCTGCTGGTGCACGGCGTGGCCAGCGGCAAGC AGGCCGAGCGGCGCGTGGCCGAGCTGCTCGAGCGCGTGGGCATGCCGCCCGAGATGGCGCAGCGCTACCCGCACGAGTTC TCGGGCGGCCAGCGCCAGCGCATCTGCATCGCGCGCGCGCTCGCCCTCGATCCCAAGGTGGTGATCGCCGACGAGTCCGT GTCGGCGCTCGACGTATCGATCCAGGCGCAGATCGTCAATCTGCTGATCGACCTGCAGCGCGACCTGGGCATCGCCTTCC TGTTCATTTCGCACGATATGGCGGTGGTCGAGCGCGTCAGCCACAGGGTGGCCGTGATGTACCTCGGCCAGATCGTCGAG ATCGGCCCGCGCCGGGCGATCTTCGAGAATCCTCAGCATCCCTACACCAGGAAGCTGATGGCGGCCGTGCCGATCGCCGA TCCCGCGCGGCGGCATATGTCGCGGACGCTGCTGTCGGACGAGATTCCCAGCCCGATCCGCCAGCTCAATGACGAACCCG TCGTGGCGCCGCTGGTGGCGGTCGGCCCGGATCACTTTGTCGCGCGCCACAGTGTCGGCGGCGCGTATTGA Protein sequence : MVDRANSLAMPENRVVQVEDLTVRFVGAERTVEAVRNLSFHVDRGETLAIVGESGSGKSVTSLALMRLVEHGGGRIAQGR IALRRRNGDIVDLGASSQRAMRSVRGADMAMIFQEPMTSLNPVFTAGEQIAETIRLHQGKDAAAARAEALRMLEQVRIPE ARSVMDRHPHQLSGGMRQRVMIAMALACKPALLIADEPTTALDVTIQAQILQLIRQLQEEMRMGVVFITHDMGVVAEVAD RVLVMYRGDKVEEGPSERIFAQPRHRYTQALLSAVPKLGAMQGTDHPARFPLLRVDESAAAEPEPPATPAGPAAPAPAES GPAGERQPILSVRDLITRFDLRGGIFSRVQRRVHAVEKVSFDLYPGETLSLVGESGCGKSTTGRSLLRLVDSQGGQVHFG GRDITKLKTAELQALRRDIQFVFQDPFASLDPRVTVGFSIMEPLLVHGVASGKQAERRVAELLERVGMPPEMAQRYPHEF SGGQRQRICIARALALDPKVVIADESVSALDVSIQAQIVNLLIDLQRDLGIAFLFISHDMAVVERVSHRVAVMYLGQIVE IGPRRAIFENPQHPYTRKLMAAVPIADPARRHMSRTLLSDEIPSPIRQLNDEPVVAPLVAVGPDHFVARHSVGGAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-93 | 41 |
