|
Name : BPP3176 (BPP3176) Accession : NP_885347.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0589 EC number : - Position : 3419127 - 3419981 bp Length : 855 bp Strand : + Note : Similar to many eg. Pseudomonas spR9. hypothetical 30.7 kDa protein SWALL:Q9RBV8 (EMBL:AF157797) (283 aa) fasta scores: E(): 9.8e-38, 43.31% id in 284 aa DNA sequence : ATGAAGAACGTCATAGCCTGCATCAGCAGTCCCAGGCGCGTGCAGAGCATTTGCGACTATGCGATCTGGGCCGTGCGCCG GCTCGGCAGCGAACTGGAGCTCCTGCACGTCGTCGAGCGCGAACAGGATGCGGTGCCCATCGCGGACCTCAGCGGCGGGA TCTGGATGGGGACCCAGGAAACCCTGCTCAAGGAACTGGCCGAGCTCGACGAGCGCCGCCAGCAGCTTGCCCAGGAGCAG GGGCGCCAGCTCTTGCAGGCAGCCACCGAGCGGGCGCGCGAGGCCGGCATACAAGGGCTGGCCGGGCTGGCCCGCCAGGG CTACCTGGTCGATGTGCTGCTGGAGCTCGAAGACGACGCGCGCCTGTTCGTGATGGGCCAGCACGACCGGCCCACCAAGC CGTCACGCCTGCTGCCCGACCAGCACCTGGAAGCGGCGGTGCGCGCGCTGCACCGGCCCGTCCTGGTGGCCGGTCCCAGT TTCGTCACGCCGACCCGCTTCCTGGTTGCCTTCGATGGCAGCGCCACCTCCCGCAAGACCGTGGAAATGGTCAGCCGCAG CCCGCTGCTGCAAGGCATGCAGGCCCATGTCCTGACCGCCGGATCGGACGCCGGCGAAGCGCGCCAGGCGCTGCAATGGG CGCGCGAACAACTGGCCCAGGGCGGTTTCGACGCCATCACGCACCATGCTGCCGAGCGGCCGGCCGATGCGCTGGCGGCC TACGCCGGGCAGCACGGCATCGATATGCTGGTCATGGGCGCCTACGGGCATTCGCGCATCCGCCAGCTGGTGCTGGGCAG CACCACCACGGAAATCCTGAGCCGGGTCTCGCTGGCGGTGCTGATCCTGCGCTAG Protein sequence : MKNVIACISSPRRVQSICDYAIWAVRRLGSELELLHVVEREQDAVPIADLSGGIWMGTQETLLKELAELDERRQQLAQEQ GRQLLQAATERAREAGIQGLAGLARQGYLVDVLLELEDDARLFVMGQHDRPTKPSRLLPDQHLEAAVRALHRPVLVAGPS FVTPTRFLVAFDGSATSRKTVEMVSRSPLLQGMQAHVLTAGSDAGEARQALQWAREQLAQGGFDAITHHAAERPADALAA YAGQHGIDMLVMGAYGHSRIRQLVLGSTTTEILSRVSLAVLILR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| uspA | AEQ20902.1 | universal stress protein A | Not tested | Tn6166 | Protein | 9e-48 | 42 |
| BJAB07104_00274 | YP_008207739.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR25 | Protein | 9e-48 | 42 |
| uspA | AEZ06029.1 | universal stress protein A | Not tested | Tn6167 | Protein | 9e-48 | 42 |
| BJAB0868_00262 | YP_008211588.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR26 | Protein | 9e-48 | 42 |
| uspA | AFH57199.1 | universal stress protein | Virulence | AbaR4a | Protein | 7e-48 | 42 |
| BJAB0868_00278 | YP_008211604.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR26 | Protein | 9e-48 | 42 |
| uspA | AFV47946.1 | universal stress protein A | Virulence | AbaR25 | Protein | 7e-48 | 42 |
| ABZJ_00238 | YP_005524194.1 | Universal stress protein | Not tested | AbaR22 | Protein | 9e-48 | 42 |
| uspA | AFV47966.1 | universal stress protein A | Virulence | AbaR25 | Protein | 7e-48 | 42 |
| ABZJ_00257 | YP_005524213.1 | Universal stress protein | Not tested | AbaR22 | Protein | 9e-48 | 42 |
| uspA | AFV47977.1 | universal stress protein A | Virulence | delta-AbaR25 | Protein | 7e-48 | 42 |
| ABTW07_3868 | YP_005797116.1 | universal stress protein | Not tested | AbaR4e | Protein | 9e-48 | 42 |
| uspA | AFV47994.1 | universal stress protein A | Virulence | delta-AbaR25 | Protein | 7e-48 | 42 |
| ABTW07_3909 | YP_005797157.1 | universal stress protein | Not tested | AbaR4e | Protein | 9e-48 | 42 |
| ABK1_0239 | YP_005512811.1 | Universal stress protein | Not tested | AbaR4d | Protein | 9e-48 | 42 |
| uspA | AEO37451.1 | universal stress protein A | Not tested | AbaR4 | Protein | 9e-48 | 42 |
| BJAB07104_00258 | YP_008207723.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR25 | Protein | 9e-48 | 42 |
