Gene Information

Name : BPP3042 (BPP3042)
Accession : NP_885221.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3281856 - 3282527 bp
Length : 672 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP1734

DNA sequence : 
ATGGATAACGGCAACTCGATTGAAGTGAAAGGGCTGGGCAAGCGTGTGGCCGACGCCGGCGGTGAACTGTCGATCCTCGA
TGGCATCGATTTTACGGTCCGGGCCGGCAGCGCCGTGGCCATCACCGGCAGTTCCGGCTCGGGCAAGTCCACCTTGCTCG
GACTGCTGGCGGGCCTGGACGTTCCCTCGTCAGGCAGCGTGCACCTGGCCGGCCAGGATCTTTTCGCCCTCGACGAGGAT
GGCCGGGCGCGCCTGCGCGCCAGCCATGTGGGCTTCGTATTCCAGTCTTTCCAGCTGCTGCCCAACCTCACGGCGCTGGA
AAACGTCATGCTGCCGCTGGAGCTGGCCGGCCAGCCGGCGCGCGAGGCGGCGCAGGCGATGCTGCGGCGGGTAGGCCTGG
GCGAGCGGCTGCACCACTACCCGCGTACGTTGTCCGGGGGCGAGCAGCAGCGGGTGTCGCTGGCGCGCGCCTTCGTGGTC
CAGCCCGATCTGCTGTTCGCCGACGAGCCCACCGGCAGCCTCGATGCGGCCACCGGCGAAACCGTCATCGACCTGATGTT
CGATCTGCACCGCGAGCACGGCACGACGCTGGTGCTGGTCACCCACGACCCCGAACTGGCCGCGCGCTGCGGCCGGCAAC
TGGTGCTGGCCGCGGGCCGCCTGCAGGACTGA

Protein sequence : 
MDNGNSIEVKGLGKRVADAGGELSILDGIDFTVRAGSAVAITGSSGSGKSTLLGLLAGLDVPSSGSVHLAGQDLFALDED
GRARLRASHVGFVFQSFQLLPNLTALENVMLPLELAGQPAREAAQAMLRRVGLGERLHHYPRTLSGGEQQRVSLARAFVV
QPDLLFADEPTGSLDAATGETVIDLMFDLHREHGTTLVLVTHDPELAARCGRQLVLAAGRLQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPP3042 NP_885221.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-34 46
BPP3042 NP_885221.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-30 45