Gene Information

Name : fimB (BPP3025)
Accession : NP_885211.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Virulence
Product : chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3254934 - 3255758 bp
Length : 825 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP1881

DNA sequence : 
ATGAATACATACGCTTGTGACGGGGCGCTCGCGCAGAGCCGGCCCCAGGGATGGTTTACGCCTGCATTTACGGTAAAGCG
GCAAGGCAGCATGGCGCGCTGGCGCCGGCGGCTGGGCGTCGCGGCGCTGGGCGCCGCCATGCTGGCGAGCCTGGCGCCGG
CCGCCCGGGCCAGCCTCGTCATCACGGGTACGCGCGTGATCTACAACGCGGGCTCGCCCGAGACCACGGTGAAGATGAGC
AACGAGGGGCAGGCCCCCGCGCTGATGCAGGCATGGATCGATGACGGCAATGCCGAGGCGAAGCCGGACGAAGTCCAGGT
GCCGTTCTTCCTGACGCCTCCGCTGGCGCGGGTGGACCCTGGCAAGGGGCAGACCTTGCGCATTTTCTTCAATGGCTACC
CGGATGGCAAGACGCTGCCGTCCGACCGCGAATCGGTCTTCTGGCTGAACGTTCTCGAAGTGCCGCCCAAGGCGACGCCC
GAGGAAGGCCACGGGGTCCTGCAGCTGACCATCCGCTCGCGCCTGAAGCTGTTCTATCGGCCCAAGGGCCTGCCCGGCAA
CCCGCTGACGGCCGCCGCCGACCTGACCTTCAAGCGCAAGGCCAACGGCGTGCTGGAGGTGCACAACCCGACGCCGTACT
ACGTGAACCTGCAAAAGCTGGAGGTGGGCGAGAACGGCGCGCACGGCAGCAAGACGCCGTGGATGCTGGCGCCGCTTTCC
TCGGATGAGCTGCGGCTGAAAGGGACGGGGGCCAAGTCGGTGCAGTACTGGGCCATCGACGACTTCGGCGGCGTGACGCC
ATATCAGGCGGCCATAGCGGACTGA

Protein sequence : 
MNTYACDGALAQSRPQGWFTPAFTVKRQGSMARWRRRLGVAALGAAMLASLAPAARASLVITGTRVIYNAGSPETTVKMS
NEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDPGKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATP
EEGHGVLQLTIRSRLKLFYRPKGLPGNPLTAAADLTFKRKANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPWMLAPLS
SDELRLKGTGAKSVQYWAIDDFGGVTPYQAAIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 3e-39 43
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimB NP_885211.1 chaperone protein VFG0007 Protein 2e-97 99
fimB NP_885211.1 chaperone protein VFG1145 Protein 2e-34 45
fimB NP_885211.1 chaperone protein VFG1468 Protein 1e-31 41