Gene Information

Name : wbpO (BPP2957)
Accession : NP_885147.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 3175884 - 3177173 bp
Length : 1290 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP1629

DNA sequence :
ATGCCGAAGAAGTTTTCCAATCCTGCAGATGTTCATCTCGCCGTCGTCGGCCTGGGGTATGTCGGGCTGCCGCTGGCCGT
GGAGTTCGGCAAGAAGCGCCCGGTGATTGGCTTCGATATCAACGAGCGCCGCATCGCCGCGCTCAAGGCCGGCCACGATC
ACACCCTGGAAGTCGAGGACGACGAACTGGCCCAGGCCGGGCAGCTCAGCTACACCGCCGAGCGCGAGGAACTGGGCAAG
GCCAATGTGTTCATCGTCACCGTGCCCACGCCGATCGACGAGTACAAGCAGCCCGACCTCACGCCGCTGGTCAAGGCCAG
CGAGACCATCGGCGCGGTGCTCAAGCGCGGCGACATCGTGATCTACGAATCGACCGTGTACCCGGGCGCCACCGAGGAAG
ACTGCGTGCCGGTGCTCGAGCGCGTGTCGGGCCTGAAGTTCAACCAGGACTTCTACGCCGGCTACAGCCCCGAGCGCATC
AACCCGGGCGACAAGGCGCACCGCGTCAACACCATCAAGAAGGTGACCTCGGGCTCGACGCCGGAAGTCGCCGAGCTGGT
CGACCAGCTGTACAACGAGATCATCACGGCCGGCACCCACAAAGCCTCGAGCATCCGCGTGGCCGAGGCCGCCAAGGTGA
TCGAGAACACGCAGCGCGACGTCAACATCGCGCTGATCAACGAGCTGGCGCTGATCTTCAACAAGATGGGCATCGACACC
GAGGCCGTGCTGCAGGCCGCCGGCACCAAGTGGAACTTCCTGCCGTTCCGTCCGGGCCTGGTGGGCGGGCACTGCATCGG
CGTGGATCCGTACTACCTGACGCACAAGGCGCAGTCGATCGGCTACCACCCCGAGATCATCCTGGCGGGCCGCCGCCTGA
ACGACTCGATGGGCGGCTACGTGGTCTCGCAGCTGGTCAAGGCCATGGCCAAGCGCCGCATCCACGTCGAGGGCGCGCGC
GTGCTGCTGATGGGCCTGACGTTCAAGGAAAACTGCCCCGACCTGCGCAACACGCGCGTGGTGGACATCGTGCGCGAGCT
GGGCGAGTACCACGTCGACGTGGACGTGTACGACCCGTGGGTGGACCCGGCCGAGGCCGAGCACGAGTACGGCATCACGC
CGGTGGCCAAGCCGGCCGCCGGGGCGTACGACGCGGTCATCCTGGCGGTGTCGCACCACCAGTTCGTCGAGATGGGCGCC
GAGGCGATCCGCAAGTTCGGCAAGGCCGAGCACATCCTGTACGACCTGAAGTATGTGCTGGCCCCCGACCAGGCTGACCT
GAGGCTGTAA

Protein sequence :
MPKKFSNPADVHLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELAQAGQLSYTAEREELGK
ANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGATEEDCVPVLERVSGLKFNQDFYAGYSPERI
NPGDKAHRVNTIKKVTSGSTPEVAELVDQLYNEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDT
EAVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAKRRIHVEGAR
VLLMGLTFKENCPDLRNTRVVDIVRELGEYHVDVDVYDPWVDPAEAEHEYGITPVAKPAAGAYDAVILAVSHHQFVEMGA
EAIRKFGKAEHILYDLKYVLAPDQADLRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-143 68
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-143 68
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-112 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpO NP_885147.1 capsular polysaccharide biosynthesis protein VFG0431 Protein 1e-143 68