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Name : prpR (BPP2805) Accession : NP_885007.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : propionate catabolism operon regulatory protein Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 3001838 - 3003766 bp Length : 1929 bp Strand : + Note : Similar to Salmonella typhimurium propionate catabolism operon regulatory protein PrpR or Stm0367 SWALL:PRPR_SALTY (SWALL:P74839) (541 aa) fasta scores: E(): 5.1e-47, 35.59% id in 635 aa, and to Pseudomonas aeruginosa propionate catabolism operon regulato DNA sequence : ATGCCCGCGCTTTCCGCCGCGCAGCCCCTGCCGCGCCTGTGCTTCGTCAGCTACCGCCAGATCCGCGAATTCGCCGCCCC GGTGATCGCCGAATACCGCAACCGGGCCGCCATCGACGTAGTGGACGGCACCTTCGCCGATGCCCTGGCGGTCGCGCGCG ACCGCATCGAGCGCAATGCGGTCGACGCCTTCATCAGCGCGGGCGCCAACGCCAGCATCCTGCGCGCCAACCTGCAGGCC CCGGTGGCCACCATCCAGCTGGGCGGCTTCGATCTGCTGCAGGCCCTCATCCGGGCGCGGCGCATCGCCAGCCGGGTCGG GGTGGTCATGTACGGCCAGACGCTGCCCGAGCTCGATGCCGTCAAGGAGCTGCTCAATATCGAGATCACCCAGTACGCCT ACCAGACGCCGTATCACGCCCGCCAGGGCTTCGAACAGCTGCGGCGCGACGGCTTCCAGGTGATCGTGGGCTCCAGCCTG GTGGTCGAGCTGGCCGAGGAAGCGGGCCTGCGCGGCATCCTCGCCTATTCGCTGGCGAGCATACGCCAGGGGTTCGAGGA CGCCATCGAGCTGGCGCGCGTGGCGCGCCTGGAGGCCGGCCGCTACGAGCAGCTCAATGGCGTGCTGCACAACCTGCAGG AGGCGGTGCTGGCGGTCGACCGCGACCACCGCATCATCGCCGTCAATCCGCCCATGCGCGAGCTGCTGGACATGCCCAAC CGCACGCTGCTGGGGCAGCGCCTGGATGCCGTCGAACCCGAGCTGTCGCTGCAGCCCACGCTGGACTCGGGCCGGGCCGA GCGCGCCGCCGTGCAGCGCTACGCCAGGCGCGACTGGATCGCCAATCGCACGCCCATTCTCGAGTACGGCAAGCTGGTCG GCGCCGCCCTGACCCTGTATGACGCGCACCGCATCCAGGAGGCCGACAGCAGCTTGCGCATGCAGCAACGCCGTCGCCAG AGCGCGGCCCGCCACCGCTTCGACACCCTGCTCGGGCAAAGCCCCGCGTTCATGCGCGCCGTCGACACCGCGCGCCGCTA CGCCGGCACCGACCTGCGCGTGCTGATCCAGGGCGAAAGCGGCGTCGGCAAGGAGCTGTTCGCCCAGTCGATCCACAACG CCAGCGCGCGCGCCCACCGCCCCTTCGTCGCCATCAATTGCGCGTCGCTGCCCGAAACCCTGCTCGAGAGCGAACTGTTC GGCTACGAGGACGGCGCCTTCACCGGGTCGCGCCGCGACGGCAAGCGCGGCCTGATCGAGGCCGCGCATACGGGCACGCT GTTTCTCGATGAGATCGGCGACATGCCGCTGTCGCTGCAGACGCGCCTGCTGCGCGTGCTGCAGGAAGGCGAAATCACGC GCCTGGGCGCCACCACGCCGGTGCCGGTGGACGTGCGCGTGCTGGCCGCCACCCATCAGCCGCTGCAGGAGCTGGTGGCC CAGCGACGCTTCCGCCAGGATCTGTACTACCGCATCAACGCCCTGCGGCTGCCGCTGCCGCCCTTGCGCGAGCGCGGCGC CGACATCGCCTTGCTGGCGACCCGCCTGGTTGCGCGCTGCCTGGACCGGCTGGGCTCGCCCCTGGACGCCGAGGCCGCGC TCGCCGCCCTGCTGCCGCGGCTGGCCGCCTATCCCTGGCCGGGCAACGTGCGCGAGCTGGAGAACCTGTGCGAGCGGATC GCGGTGTTCCTGCTGCAGTTCGACGACGCCGAGGCGATCCGCCATGACGCCTTGCGCCACGAATGCCCCGAGCTGTTCGA GCACCCCGCCGCCATGGACGCGCCGCGTCCGGAGCGCATCGCGCAGGCCCTGCGCCAGGCCGATGGCAATCGCGCACAGG CCGCCGCGCAGCTGGGCGTGAGCCGCTCGACGCTGTGGCGCTGGCTCAGGCAGATCGACGCCGCCGACGATGGCGCGCGC GCGACTTGA Protein sequence : MPALSAAQPLPRLCFVSYRQIREFAAPVIAEYRNRAAIDVVDGTFADALAVARDRIERNAVDAFISAGANASILRANLQA PVATIQLGGFDLLQALIRARRIASRVGVVMYGQTLPELDAVKELLNIEITQYAYQTPYHARQGFEQLRRDGFQVIVGSSL VVELAEEAGLRGILAYSLASIRQGFEDAIELARVARLEAGRYEQLNGVLHNLQEAVLAVDRDHRIIAVNPPMRELLDMPN RTLLGQRLDAVEPELSLQPTLDSGRAERAAVQRYARRDWIANRTPILEYGKLVGAALTLYDAHRIQEADSSLRMQQRRRQ SAARHRFDTLLGQSPAFMRAVDTARRYAGTDLRVLIQGESGVGKELFAQSIHNASARAHRPFVAINCASLPETLLESELF GYEDGAFTGSRRDGKRGLIEAAHTGTLFLDEIGDMPLSLQTRLLRVLQEGEITRLGATTPVPVDVRVLAATHQPLQELVA QRRFRQDLYYRINALRLPLPPLRERGADIALLATRLVARCLDRLGSPLDAEAALAALLPRLAAYPWPGNVRELENLCERI AVFLLQFDDAEAIRHDALRHECPELFEHPAAMDAPRPERIAQALRQADGNRAQAAAQLGVSRSTLWRWLRQIDAADDGAR AT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 1e-96 | 45 |
