|
Name : BPP2296 (BPP2296) Accession : NP_884542.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : short chain dehydrogenase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 2442610 - 2443377 bp Length : 768 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP1923 DNA sequence : ATGACGCAACGCTTATCCGGCAGGATCGCCATCGTGACCGGCGCGGGCTCGGGAATCGGCGAGGCCACGGCCCGCCTGAT GGCGCGCGAGGGCGCGGTCGTGGTGGTGGCCGACAAGGCCATCGAGGCGGCCGAGCGCGTCGCGCAGGCCATCGTGGCCG AGGGCGGACGCGCCGAGGCGCGCCAGGCCGACGTGGGCGAGGCGCAATCGGTGCGCGCCCTGGTCGACGCCGTGGCGGCG CGCTGGGAGCGCATCGACGTGCTGGTCAACAATGCCGGCTACGGTATCGCCGCCACCGTGGTCGATACCGACGAGGCCGA CTGGTCGGCGCTGATGCGCGTCAACGTCGACGGCGTGTTCCTGGGCTGCAAGTACGTCATCCCGATCATGCAGCGCCAGG GGGCCGGCGTGATCGTCAATACGGCGTCGGCGGGCGCGCTGGTGGGCTTGCGCCAGCGCGCCGCGTATTGCGCCTCCAAG GGCGCGGTGGCGGCGCTGACGCGCGCCATGGCGCTGGACCACGCCACCGAGGGGATTCGCATCAACTGCGTGGCGCCGGG CACGATCGAGTCGCCGTACTTCCGCGAGATCTACGCGCGCAGTGACGATCCCGAAGCCTTGCGCGCCAGCCTGGCGGCGC GCCAGCCCATGAACCGCCTCGGCCAGCCCGAGGAAGTGGCGCACGCCATCGTTTTCCTGGCCAGCGACGACGCCTCGTTC GCCACCGGCAGCACGCTGGTGCTCGACGGCGGCCTGACGGCGGCGTAG Protein sequence : MTQRLSGRIAIVTGAGSGIGEATARLMAREGAVVVVADKAIEAAERVAQAIVAEGGRAEARQADVGEAQSVRALVDAVAA RWERIDVLVNNAGYGIAATVVDTDEADWSALMRVNVDGVFLGCKYVIPIMQRQGAGVIVNTASAGALVGLRQRAAYCASK GAVAALTRAMALDHATEGIRINCVAPGTIESPYFREIYARSDDPEALRASLAARQPMNRLGQPEEVAHAIVFLASDDASF ATGSTLVLDGGLTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 5e-29 | 41 |
