Gene Information

Name : lolD (BPP2051)
Accession : NP_884309.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2191340 - 2192035 bp
Length : 696 bp
Strand : +
Note : ortholog of Bordetella pertussis (BX470248) BP1108

DNA sequence : 
ATGACTGAGCCGAACGACACCGGCCCGGCCCTGCAGGCCGAGCACCTGGGCAAGGTCTACGACGAAGGCCCGGCGCGCAT
CGAAGTGCTCAGCGACGTGTCGCTGAGCGTGGCGCGCGGCGAGATGGTCGCCATCGTCGGCGCCTCGGGCTCGGGCAAGA
GCACCTTGCTGCACATCCTGGGCCTGTTGGACGTGCCCTCCAGCGGCACGGTCAGCGTCGACGGCGTGCCCGCCGCGGGG
CTGTCCGAGAAGCGCAAGAGCGCGCTGCGCAACCGCAGCCTCGGCTTCGTGTACCAGTTCCACCACCTGCTGCCGGAATT
CTCGGCCCTGGACAATGTGGCCATGCCGCTGATCGTGCGGCGCGAGAATCGCGACCGTGCGCGCGCCCAGGCACGCGAAG
TGCTGGAACTGGTGGGGCTGGCCGCGCGCGAGGAGCACTTTCCGGGCCAGCTGTCCGGGGGCGAGCGGCAGCGCGTGGCG
CTGGCGCGCGCCCTGGTGACGCGGCCGGCCTGCGTGCTGGCCGACGAGCCCACCGGCAACCTGGATCGCCATACGGCGCA
CAATATGTTCGAGCTGCTCACGCGCGTGAACCGCGAATCCGGCACGGCTTTCGTGATCGTCACCCACGATCCGGAGCTGG
CCGCACGCGCCGATCGCCAGCTGCACATGGAAAACGGGCGCCTGCAGCCGGATTGA

Protein sequence : 
MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAG
LSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVA
LARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_884309.1 lipoprotein releasing system ATP-binding protein NC_008702.1.4606598. Protein 3e-34 46
lolD NP_884309.1 lipoprotein releasing system ATP-binding protein NC_012469.1.7686878. Protein 8e-42 46