|
Name : pcaI (BPP2019) Accession : NP_884277.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : 3-oxoadipate CoA-transferase subunit A Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1788 EC number : 2.8.3.6 Position : 2158743 - 2159459 bp Length : 717 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP1788 DNA sequence : ATGACCGCCGGCACATCAACGCATTTCAACCAGGTAAACGGGGTAGGCATGCTCAACAAGACCTGCGAGTCCGCCGACGA GGCGGTCAGTGTCGTGGAAAGTGGCGCAACAATCCTGATCAGCGGCTTCGGGGACATCGGCTTGCCGTTCGAACTGTTGC ATGCGCTGGCGCGCACCTCGGTCAAGGATCTCACCATCGTCTCCAACAATGCCGGGACGGGCGAACTGGGGTTGTCGCGG CTGTTCAGGAACCGCCAGGTTTCGCGCCTGATCGCTTCTTTTCCGTCGCAGCCGGATTCGCACCATTATTTCGCCGCGTA CCAGGAAGGACTGGTGGACCTGGAGCTGGTGCCGCAGGGCACGCTGGCCGAACGCATCCGCGCGGCGGGCGCCGGCCTGG CCGGGTTCTTCACGCCCACCGGCTACGGCACCGAGCTGGCGCAGGGCAAGGAGTGCCGGATGTTCAAGGGCAAGGGATAT GTCTTCGAGGAAGCCCTGCCAGGCGATTTCGCCTTCATCAAGGCGCACGTCGCCGATGCCTACGGCAACCTCCGGTATCG CCGCGCCAGCCGGACTTTCAATCCCATCATGGCCATGGCGGCGCGCACGACCATCGCCGAGGCCAAGCAGATGGTTCCCG TCGGCAGTATCGATCCCGACGACGTCCATACGCCCGGCGTATTCGTCGACCGGATAGTGGAGGTGCGAGATGAGTAA Protein sequence : MTAGTSTHFNQVNGVGMLNKTCESADEAVSVVESGATILISGFGDIGLPFELLHALARTSVKDLTIVSNNAGTGELGLSR LFRNRQVSRLIASFPSQPDSHHYFAAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGY VFEEALPGDFAFIKAHVADAYGNLRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDVHTPGVFVDRIVEVRDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 5e-33 | 45 |
