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Name : hslU (BPP0176) Accession : NP_882537.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 188722 - 190056 bp Length : 1335 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCCGCAAATCACATGACCCCCGACGAGATCGTCGCCGAACTCGACAAATTCATCATTGGCCAGAATCGCGCCAAGCG CGCGGTCGCGGTGGCGCTGCGCAACCGCTGGCGGCGCCAGCAGGTCGCCGAGCCGCTGCGCCATGAGATCCACCCCAAGA ACATCCTGATGATCGGGCCGACCGGGGTGGGCAAGACCGAAATCGCCCGCCGCCTGGCCAAGCTGGCCAATGCGCCGTTC ATCAAGATCGAAGCGACCAAGTTCACCGAGGTGGGCTATGTGGGCCGCGACGTCGACACCATCATCCGCGACCTGACCGA GTACTCGATCAAGCAGACACGCGAGCTGGAAATGCGCCGCGTGCGCAGCCATGCCGAAGACGCGGCCGAAGACCGCATCC TCGACGCGCTGGTGCCGCCGCCGCGCGGCGCCTCCGGCGAGCCCGAGCGCGGCGAGGACAACAGCGCGCGCCAGACTTTC CGCAAACGCCTGCGCGAGGGCAAGATCGACGACCTGGAGATCGAGATCGAGATCGCCCAGCCCATGCCGCAGATGGACGT CATGACGCCGCCCGGCATGGAAGAAATGGCCGAGCAGTTGCGCGGCATGTTCGCCGGCCTGGCGCGCGACAAGAAGAAAT CCAAGAAGATCAAGGTCAGGGAAGCCTTCAAGCTGATCGTCGAGGAAGAAGCCGCCAAGCGCGTCAACGAAGACGATCTG CGCGCGGCCGCGATCACCAACGTCGAACAGAACGGCATCGTGTTCCTGGACGAAATCGACAAGATCGCCGCACGCCAGGA GACGGGCGGCGCCGACGTGTCGCGCCAGGGCGTGCAGCGCGATCTGCTGCCGCTGGTCGAAGGCACCACGGTCAATACCC GCTACGGCATGGTGCGTACCGACCATATTCTGTTCATCGCCTCGGGCGCCTTCCATCTGGCCCGCCCCTCGGACCTCATC CCTGAACTGCAGGGACGCTTCCCCATCCGGGTCGAACTGGATTCGCTGAGCGCCGAAGACTTCGTCAGCATCCTGTCCGA GACGGACGCTTCGCTGATCAAGCAATACACCGCCCTGCTCGGCACCGAGGATGTGAAGCTGGAATTCACCGACGACGGCA TCCGCCGGCTGGCCGAACTGGCATTCTCGGTCAACGAGCGCACCGAGAACATTGGCGCGCGACGCCTGTACACGGTGATG GAAAAACTGCTGGAAGAGCTGTCGTTCGATGCCAGCGCCAACTCGGGCGAAGTGATCACCATCGACGCCGCCTACGTCGA CCTGCAACTGGCCGAGACGGCCGGCAGCCAGGACCTGGCCCGCTACGTGCTGTAG Protein sequence : MSANHMTPDEIVAELDKFIIGQNRAKRAVAVALRNRWRRQQVAEPLRHEIHPKNILMIGPTGVGKTEIARRLAKLANAPF IKIEATKFTEVGYVGRDVDTIIRDLTEYSIKQTRELEMRRVRSHAEDAAEDRILDALVPPPRGASGEPERGEDNSARQTF RKRLREGKIDDLEIEIEIAQPMPQMDVMTPPGMEEMAEQLRGMFAGLARDKKKSKKIKVREAFKLIVEEEAAKRVNEDDL RAAAITNVEQNGIVFLDEIDKIAARQETGGADVSRQGVQRDLLPLVEGTTVNTRYGMVRTDHILFIASGAFHLARPSDLI PELQGRFPIRVELDSLSAEDFVSILSETDASLIKQYTALLGTEDVKLEFTDDGIRRLAELAFSVNERTENIGARRLYTVM EKLLEELSFDASANSGEVITIDAAYVDLQLAETAGSQDLARYVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 1e-94 | 45 |
